RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 MMABQ96EY8 250 aaPredicted RBP16.45■□□□□ 0.22
CXXC1-212ENST00000589940 AMDHD1Q96NU7 426 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 NDC1Q9BTX1 674 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 KAT8Q9H7Z6 458 aaKnown RBP16.45■□□□□ 0.22
CXXC1-212ENST00000589940 GMPR2Q9P2T1 348 aaKnown RBP16.45■□□□□ 0.22
CXXC1-212ENST00000589940 GMEB1Q9Y692 573 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 ZNF780BQ9Y6R6 833 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 EVPLLA8MZ36 301 aa16.44■□□□□ 0.22
CXXC1-212ENST00000589940 ZNF749O43361 778 aa16.44■□□□□ 0.22
CXXC1-212ENST00000589940 SIM1P81133 766 aaPredicted RBP16.44■□□□□ 0.22
CXXC1-212ENST00000589940 ZFP36L1Q07352 338 aaKnown RBP16.44■□□□□ 0.22
CXXC1-212ENST00000589940 CEBPEQ15744 281 aa16.44■□□□□ 0.22
CXXC1-212ENST00000589940 ZNF551Q7Z340 670 aaPredicted RBP16.44■□□□□ 0.22
CXXC1-212ENST00000589940 SAMD14Q8IZD0 417 aaPredicted RBP16.44■□□□□ 0.22
CXXC1-212ENST00000589940 ZFP28Q8NHY6 868 aa16.44■□□□□ 0.22
CXXC1-212ENST00000589940 ZFP90Q8TF47 636 aa16.44■□□□□ 0.22
CXXC1-212ENST00000589940 KCTD14Q9BQ13 255 aaPredicted RBP16.44■□□□□ 0.22
CXXC1-212ENST00000589940 TRIM4Q9C037 500 aa16.44■□□□□ 0.22
CXXC1-212ENST00000589940 GLIPR2Q9H4G4 154 aa16.44■□□□□ 0.22
CXXC1-212ENST00000589940 TPT1P8Q9HAU6 139 aa16.44■□□□□ 0.22
CXXC1-212ENST00000589940 SIDT1Q9NXL6 827 aaKnown RBP16.44■□□□□ 0.22
CXXC1-212ENST00000589940 HCN3Q9P1Z3 774 aa16.44■□□□□ 0.22
CXXC1-212ENST00000589940 NUP214P35658 2090 aaPredicted RBP16.44■□□□□ 0.22
CXXC1-212ENST00000589940 MGRN1O60291 552 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 ENTPD5O75356 428 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 RNH1P13489 461 aaKnown RBP16.43■□□□□ 0.22
CXXC1-212ENST00000589940 CSNK2A2P19784 350 aaPredicted RBP16.43■□□□□ 0.22
CXXC1-212ENST00000589940 TGM1P22735 817 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 PPIBP23284 216 aaKnown RBP16.43■□□□□ 0.22
CXXC1-212ENST00000589940 NCBP2P52298 156 aaKnown RBP eCLIP16.43■□□□□ 0.22
CXXC1-212ENST00000589940 ARSFP54793 590 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 MS4A2Q01362 244 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 BNIP2Q12982 314 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 HSPB3Q12988 150 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 B3GNT8Q7Z7M8 397 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 IFNEQ86WN2 208 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 SHISA5Q8N114 240 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 OR10A6Q8NH74 314 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 PSMA8Q8TAA3 256 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 ADAMTS18Q8TE60 1221 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 ZNF681Q96N22 645 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 OR6C1Q96RD1 312 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 CDC6Q99741 560 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 CXorf36Q9H7Y0 433 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 EP300Q09472 2414 aaPredicted RBP16.43■□□□□ 0.22
CXXC1-212ENST00000589940 ACOT8O14734 319 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 FEN1P39748 380 aaKnown RBP16.43■□□□□ 0.22
CXXC1-212ENST00000589940 TRAP1Q12931 704 aaKnown RBP16.43■□□□□ 0.22
CXXC1-212ENST00000589940 FLOT2Q14254 428 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 PRAMEF17Q5VTA0 474 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 METTL27Q8N6F8 245 aaPredicted RBP16.43■□□□□ 0.22
CXXC1-212ENST00000589940 OR4K14Q8NGD5 310 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 SUN3Q8TAQ9 357 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 TANKQ92844 425 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 ZNF583Q96ND8 569 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 SLC35A5Q9BS91 424 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 PCDHAC1Q9H158 963 aa16.43■□□□□ 0.22
CXXC1-212ENST00000589940 FAM227AF5H4B4 570 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 BCAS2O75934 225 aaPredicted RBP16.42■□□□□ 0.22
CXXC1-212ENST00000589940 C8orf89P0DMQ9 161 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 ALAS2P22557 587 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 CSTF2P33240 577 aaKnown RBP eCLIP16.42■□□□□ 0.22
CXXC1-212ENST00000589940 MPIP34949 423 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 ZNF750Q32MQ0 723 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 GPR155Q7Z3F1 870 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 CLEC4FQ8N1N0 589 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 TMEM52Q8NDY8 209 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 PIF1Q9H611 641 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 DHCR7Q9UBM7 475 aaKnown RBP16.42■□□□□ 0.22
CXXC1-212ENST00000589940 NDOR1Q9UHB4 597 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 RARRES3Q9UL19 164 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 CDC14AQ9UNH5 594 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 SRPK3Q9UPE1 567 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 CORO2BQ9UQ03 480 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 TMEM184BQ9Y519 407 aaPredicted RBP16.42■□□□□ 0.22
CXXC1-212ENST00000589940 SNX8Q9Y5X2 465 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 A0A1W2PS29 197 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 DSCR3O14972 297 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 FOXD2O60548 495 aaPredicted RBP16.42■□□□□ 0.22
CXXC1-212ENST00000589940 C1QCP02747 245 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 GPX2P18283 190 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 UQCRC2P22695 453 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 HTR1EP28566 365 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 SOAT1P35610 550 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 XKP51811 444 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 PDX1P52945 283 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 MAT1AQ00266 395 aaKnown RBP16.42■□□□□ 0.22
CXXC1-212ENST00000589940 ILKQ13418 452 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 PTRH1Q86Y79 214 aaKnown RBP16.42■□□□□ 0.22
CXXC1-212ENST00000589940 CCDC116Q8IYX3 515 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 SIRT3Q9NTG7 399 aaPredicted RBP16.42■□□□□ 0.22
CXXC1-212ENST00000589940 BCAP29Q9UHQ4 241 aa16.42■□□□□ 0.22
CXXC1-212ENST00000589940 MRPS33Q9Y291 106 aaKnown RBP16.42■□□□□ 0.22
CXXC1-212ENST00000589940 A0A1B0GX78 115 aa16.41■□□□□ 0.22
CXXC1-212ENST00000589940 BLACEA4D250 179 aa16.41■□□□□ 0.22
CXXC1-212ENST00000589940 AGRPO00253 132 aa16.41■□□□□ 0.22
CXXC1-212ENST00000589940 NTRK1P04629 796 aa16.41■□□□□ 0.22
CXXC1-212ENST00000589940 CDK9P50750 372 aaKnown RBP16.41■□□□□ 0.22
CXXC1-212ENST00000589940 FOLH1Q04609 750 aa16.41■□□□□ 0.22
CXXC1-212ENST00000589940 DUSP2Q05923 314 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms