RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 TEX10Q9NXF1 929 aaPredicted RBP18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 P2RX2Q9UBL9 471 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 MKI67P46013 3256 aaKnown RBP18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 OR2A25A4D2G3 310 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 PRR23AA6NEV1 266 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 PRR19A6NJB7 356 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 CLCA1A8K7I4 914 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 K7EQS6 105 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 OXSR1O95747 527 aaPredicted RBP18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 GPC1P35052 558 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 IDH2P48735 452 aaKnown RBP18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 RPS26P62854 115 aaKnown RBP18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 TMED1Q13445 227 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 TP53BP2Q13625 1128 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 DGUOKQ16854 277 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 PARM1Q6UWI2 310 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 DNAJC22Q8N4W6 341 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 OR9Q2Q8NGE9 314 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 OR52E1Q8NGJ3 308 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 UTP15Q8TED0 518 aaKnown RBP18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 HSPBAP1Q96EW2 488 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 SLC35G5Q96KT7 338 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 C17orf62Q9BQA9 187 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 SLC35C2Q9NQQ7 365 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 DUSP12Q9UNI6 340 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 COLEC10Q9Y6Z7 277 aa18.18■□□□□ 0.5
PRKCSH-209ENST00000589838 CCDC88CQ9P219 2028 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 IGKV1-8A0A0C4DH67 115 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 HMGN4O00479 90 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 MAN1A2O60476 641 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 PFDN1O60925 122 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 LAMP2P13473 410 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 ZNF12P17014 697 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 NR4A1P22736 598 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 PPP2R1BP30154 601 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 IGFALSP35858 605 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 NDUFAF5Q5TEU4 345 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 BHLHB9Q6PI77 547 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 Q6ZPB1 254 aaPredicted RBP18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 KRT73Q86Y46 540 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 PLD3Q8IV08 490 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 SLC44A2Q8IWA5 706 aaPredicted RBP18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 TEFMQ96QE5 360 aaKnown RBP18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 BBS4Q96RK4 519 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 ITPAQ9BY32 194 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 PREBQ9HCU5 417 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 SEMA3GQ9NS98 782 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 FKBP14Q9NWM8 211 aa18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 PNMA8BQ9ULN7 279 aaPredicted RBP18.17■□□□□ 0.5
PRKCSH-209ENST00000589838 CLDN24A6NM45 220 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 SLC28A2O43868 658 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 ZBTB11O95625 1053 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 CDK1P06493 297 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 CMPK1P30085 196 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 BCL6P41182 706 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 GNA13Q14344 377 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 PUM1Q14671 1186 aaKnown RBP eCLIP18.16■□□□□ 0.59e-7■□□□□ 10.7
PRKCSH-209ENST00000589838 GANABQ14697 944 aaKnown RBP18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 TBCEQ15813 527 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 RPE65Q16518 533 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 ADPRMQ3LIE5 342 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 RPS26P11Q5JNZ5 115 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 AQP11Q8NBQ7 271 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 APOBEC4Q8WW27 367 aaKnown RBP18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 ASB12Q8WXK4 309 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 RAB8BQ92930 207 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 SCARF2Q96GP6 870 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 ZNF354BQ96LW1 612 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 AMDHD1Q96NU7 426 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 SPATA5L1Q9BVQ7 753 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 SARGQ9BW04 601 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 GLIPR2Q9H4G4 154 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 C5AR2Q9P296 337 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 SCML1Q9UN30 329 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 B3GNT3Q9Y2A9 372 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 TBC1D3DA0A087WVF3 549 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 TBC1D3IA0A087WXS9 549 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 TBC1D3EA0A087X179 549 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 TBC1D3KA0A087X1G2 549 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 SH3D21A4FU49 640 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 TBC1D3FA6NER0 549 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 TBC1D3LB9A6J9 549 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 LATO43561 262 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 PRICKLE3O43900 615 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 ADAP00813 363 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 HOXC4P09017 264 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 TBC1D3HP0C7X1 549 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 TSFMP43897 325 aaKnown RBP18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 KCNJ5P48544 419 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 GSSP48637 474 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 KHKP50053 298 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 DGCR6Q14129 220 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 ZNF846Q147U1 533 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 TBC1D3GQ6DHY5 549 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 TBC1D3CQ6IPX1 549 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 TMEM64Q6YI46 380 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 Q6ZNX1 250 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 SLCO6A1Q86UG4 719 aa18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 TBC1D3Q8IZP1 549 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-209ENST00000589838 SFXN5Q8TD22 340 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms