RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 OR4K14Q8NGD5 310 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 DNAJB14Q8TBM8 379 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 STARD8Q92502 1023 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 GFM2Q969S9 779 aaKnown RBP12.8□□□□□ -0.36
VMP1-210ENST00000589823 VPS50Q96JG6 964 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 SLC45A3Q96JT2 553 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 MARK4Q96L34 752 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 CATSPER2Q96P56 530 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 PRPF18Q99633 342 aaKnown RBP12.8□□□□□ -0.36
VMP1-210ENST00000589823 DPY30Q9C005 99 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 REEP4Q9H6H4 257 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 NECTIN3Q9NQS3 549 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 GIMAP4Q9NUV9 329 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 EHD3Q9NZN3 535 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 HEY2Q9UBP5 337 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 UTS2RQ9UKP6 389 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 ZNF780BQ9Y6R6 833 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 CEP295Q9C0D2 2601 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 ASPMQ8IZT6 3477 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 ZNF891A8MT65 544 aaPredicted RBP12.79□□□□□ -0.36
VMP1-210ENST00000589823 FGF17O60258 216 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 ERAL1O75616 437 aaKnown RBP12.79□□□□□ -0.36
VMP1-210ENST00000589823 GPR75O95800 540 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 RECKO95980 971 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 FURINP09958 794 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 MMP11P24347 488 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 METTL21CQ5VZV1 264 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 TICAM1Q8IUC6 712 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 SPACA3Q8IXA5 215 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 OR4N5Q8IXE1 308 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 SAMD14Q8IZD0 417 aaPredicted RBP12.79□□□□□ -0.36
VMP1-210ENST00000589823 ZSCAN1Q8NBB4 408 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 C10orf82Q8WW14 230 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 TSLPQ969D9 159 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 UCN3Q969E3 161 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 NACC2Q96BF6 587 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 ANKRD9Q96BM1 317 aaPredicted RBP12.79□□□□□ -0.36
VMP1-210ENST00000589823 PPCDCQ96CD2 204 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 KLHL29Q96CT2 875 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 MTERF3Q96E29 417 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 ZBTB18Q99592 522 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 ALOXE3Q9BYJ1 711 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 BRINP2Q9C0B6 783 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 RABEP2Q9H5N1 569 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 C5AR2Q9P296 337 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 ENTPD4Q9Y227 616 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 RAXQ9Y2V3 346 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 GPR45Q9Y5Y3 372 aa12.79□□□□□ -0.36
VMP1-210ENST00000589823 IGKV3D-11A0A0A0MRZ8 115 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 WASHC1A8K0Z3 465 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 SCAMP2O15127 329 aaKnown RBP12.78□□□□□ -0.36
VMP1-210ENST00000589823 SNX3O60493 162 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 TBX19O60806 448 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 IFNA16P05015 189 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 COX7A2P14406 83 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 ATP4BP51164 291 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 CLNS1AP54105 237 aaKnown RBP12.78□□□□□ -0.36
VMP1-210ENST00000589823 NME5P56597 212 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 OR4D2P58180 307 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 ID2Q02363 134 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 SRSF6Q13247 344 aaKnown RBP12.78□□□□□ -0.36
VMP1-210ENST00000589823 UGT8Q16880 541 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 PDCD4Q53EL6 469 aaKnown RBP12.78□□□□□ -0.36
VMP1-210ENST00000589823 TMEM205Q6UW68 189 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 ANKRD37Q7Z713 158 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 PROSER1Q86XN7 944 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 TMEM151BQ8IW70 566 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 MIER2Q8N344 545 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 EXOSC8Q96B26 276 aaKnown RBP12.78□□□□□ -0.36
VMP1-210ENST00000589823 IP6K3Q96PC2 410 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 DGAT2Q96PD7 388 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 PELOQ9BRX2 385 aaKnown RBP12.78□□□□□ -0.36
VMP1-210ENST00000589823 SLC35C2Q9NQQ7 365 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 MRGBPQ9NV56 204 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 ATAD3AQ9NVI7 634 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 SH3BP4Q9P0V3 963 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 ATP6V1HQ9UI12 483 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 CES1P1Q9UKY3 287 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 EXO1Q9UQ84 846 aaKnown RBP12.78□□□□□ -0.36
VMP1-210ENST00000589823 NUP210LQ5VU65 1888 aa12.78□□□□□ -0.36
VMP1-210ENST00000589823 MYOCOSA0A1B0GUC4 107 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 TCRBV16S1A1N1A0A5B0 115 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 CDC14CA4D256 554 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 GABRR3A8MPY1 467 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 PEX12O00623 359 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 OR10H2O60403 315 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 SLC22A3O75751 556 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 FAM107AO95990 144 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 PORP16435 677 aaPredicted RBP12.77□□□□□ -0.37
VMP1-210ENST00000589823 NTSP30990 170 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 XKP51811 444 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 EFNA3P52797 238 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 C21orf58P58505 322 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 PLIN5Q00G26 463 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 IL10RAQ13651 578 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 PDE7AQ13946 482 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 SQLEQ14534 574 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 CPTPQ5TA50 214 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 ANKRD26P1Q6NSI1 321 aa12.77□□□□□ -0.37
VMP1-210ENST00000589823 CCDC81Q6ZN84 652 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms