RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 TFPTP0C1Z6 253 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 UGT2B7P16662 529 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 RHCEP18577 417 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 IGFBP5P24593 272 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 ALDH3B2P48448 385 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 KHKP50053 298 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 HLCSP50747 726 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 NCBP2P52298 156 aaKnown RBP eCLIP9.84□□□□□ -0.83
VPS25-203ENST00000589520 HMGA2P52926 109 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 SMIM11AP58511 58 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 GABARAPL2P60520 117 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 VLDLRP98155 873 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 TP53BP2Q13625 1128 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 GPR18Q14330 331 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 FZD2Q14332 565 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 ELOCQ15369 112 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 PRSS53Q2L4Q9 553 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 IQCCQ4KMZ1 466 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 COX20Q5RI15 118 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 ARMC6Q6NXE6 501 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 ZNF793Q6ZN11 406 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 FAM92BQ6ZTR7 304 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 VTCN1Q7Z7D3 282 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 GKN2Q86XP6 184 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 KRT73Q86Y46 540 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 SLC22A18ASQ8N1D0 253 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 CCL4L1Q8NHW4 92 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 FLVCR1-AS1Q8TAF5 88 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 BBS10Q8TAM1 723 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 BAHD1Q8TBE0 780 aaPredicted RBP9.84□□□□□ -0.83
VPS25-203ENST00000589520 SPPL2AQ8TCT8 520 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 MAL2Q969L2 176 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 RERGQ96A58 199 aaPredicted RBP9.84□□□□□ -0.83
VPS25-203ENST00000589520 CNDP2Q96KP4 475 aaKnown RBP9.84□□□□□ -0.83
VPS25-203ENST00000589520 MUS81Q96NY9 551 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 ZNF300Q96RE9 604 aaPredicted RBP9.84□□□□□ -0.83
VPS25-203ENST00000589520 TSC22D3Q99576 134 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 NRTNQ99748 197 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 APOL4Q9BPW4 351 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 ZFYVE21Q9BQ24 234 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 TUBA1CQ9BQE3 449 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 PSD2Q9BQI7 771 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 NPLQ9BXD5 320 aaPredicted RBP9.84□□□□□ -0.83
VPS25-203ENST00000589520 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.84□□□□□ -0.83
VPS25-203ENST00000589520 GLIPR2Q9H4G4 154 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 KLHL31Q9H511 634 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 TRIM45Q9H8W5 580 aaPredicted RBP9.84□□□□□ -0.83
VPS25-203ENST00000589520 SMURF2Q9HAU4 748 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 LYRM4Q9HD34 91 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 LTB4R2Q9NPC1 389 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 SIRT3Q9NTG7 399 aaPredicted RBP9.84□□□□□ -0.83
VPS25-203ENST00000589520 TEX10Q9NXF1 929 aaPredicted RBP9.84□□□□□ -0.83
VPS25-203ENST00000589520 CALML5Q9NZT1 146 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 PDP1Q9P0J1 537 aaPredicted RBP9.84□□□□□ -0.83
VPS25-203ENST00000589520 P2RX2Q9UBL9 471 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 APOBEC3BQ9UH17 382 aaKnown RBP9.84□□□□□ -0.83
VPS25-203ENST00000589520 PILRAQ9UKJ1 303 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 CES1P1Q9UKY3 287 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 CFAP54Q96N23 3096 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 F5P12259 2224 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 MYO9BQ13459 2157 aa9.84□□□□□ -0.83
VPS25-203ENST00000589520 IGHV1OR15-9A0A0B4J2B8 117 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 PRAMEF33A0A0G2JMD5 474 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 A0A1W2PR48 441 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 OR6C74A6NCV1 312 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 ARRDC5A6NEK1 342 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 DUXAA6NLW8 204 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 hCG_2039718K7EN88 272 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 ZNF701M0R085 212 aaPredicted RBP9.83□□□□□ -0.84
VPS25-203ENST00000589520 TNFRSF11BO00300 401 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 EMC8O43402 210 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 ASNA1O43681 348 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 B3GALT2O43825 422 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 PGM3O95394 542 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 FHP07954 510 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 GNAO1P09471 354 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 NR2F6P10588 404 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 ETS2P15036 469 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 ATP6V1B1P15313 513 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 POLR2CP19387 275 aaPredicted RBP9.83□□□□□ -0.84
VPS25-203ENST00000589520 CD72P21854 359 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 MATN1P21941 496 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 CRISP3P54108 245 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 SKP1P63208 163 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 BTN3A2P78410 334 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 HSPB3Q12988 150 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 KCNAB2Q13303 367 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 C16orf72Q14CZ0 275 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 NADK2Q4G0N4 442 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 ZNF691Q5VV52 312 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 FAHD1Q6P587 224 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 SLC36A4Q6YBV0 504 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 VN1R4Q7Z5H5 301 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 TMEM179BQ7Z7N9 219 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 TSPYL5Q86VY4 417 aaPredicted RBP9.83□□□□□ -0.84
VPS25-203ENST00000589520 CYP4Z1Q86W10 505 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 LINC00471Q8N535 108 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 FLCNQ8NFG4 579 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 OR8K5Q8NH50 307 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 OR5AK3PQ8NH89 298 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms