RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 OGFOD2Q6N063 350 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 SLC48A1Q6P1K1 146 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 EPGNQ6UW88 154 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 KIRREL2Q6UWL6 708 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 ACAD11Q709F0 780 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 NDUFAF7Q7L592 441 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 CPEB2Q7Z5Q1 589 aaKnown RBP18.37■□□□□ 0.53
CIRBP-220ENST00000588917 PPP1R32Q7Z5V6 425 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 ANKRD37Q7Z713 158 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 TMEM52Q8NDY8 209 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 OR4K14Q8NGD5 310 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.37■□□□□ 0.53
CIRBP-220ENST00000588917 DNAJB14Q8TBM8 379 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 ACTRT2Q8TDY3 377 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 RBM18Q96H35 190 aaKnown RBP18.37■□□□□ 0.53
CIRBP-220ENST00000588917 MAELQ96JY0 434 aaKnown RBP18.37■□□□□ 0.53
CIRBP-220ENST00000588917 PELOQ9BRX2 385 aaKnown RBP18.37■□□□□ 0.53
CIRBP-220ENST00000588917 CPNE5Q9HCH3 593 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 TEX10Q9NXF1 929 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-220ENST00000588917 P4HTMQ9NXG6 502 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 MGAQ8IWI9 3026 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 AHCTF1Q8WYP5 2266 aa18.37■□□□□ 0.53
CIRBP-220ENST00000588917 IGKV3D-11A0A0A0MRZ8 115 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 SDHDO14521 159 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 SOCS6O14544 535 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 ZNF195O14628 629 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 PGRMC2O15173 223 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 IL3P08700 152 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 TROVE2P10155 538 aaKnown RBP eCLIP18.36■□□□□ 0.53
CIRBP-220ENST00000588917 BCKDHAP12694 445 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 DDCP20711 480 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 MAOAP21397 527 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 ALDH9A1P49189 494 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 HNRNPFP52597 415 aaKnown RBP18.36■□□□□ 0.53
CIRBP-220ENST00000588917 AP2B1P63010 937 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 FAM71E1Q6IPT2 247 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 MRGPREQ86SM8 312 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 CFAP46Q8IYW2 2715 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 SHISA5Q8N114 240 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 OR11G2Q8NGC1 345 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 MTERF3Q96E29 417 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 LPAR4Q99677 370 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 TUBB6Q9BUF5 446 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 TRIM55Q9BYV6 548 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 ZNF700Q9H0M5 742 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 MIEF1Q9NQG6 463 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 NECTIN3Q9NQS3 549 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 MAN2B2Q9Y2E5 1009 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 ZNF780BQ9Y6R6 833 aa18.36■□□□□ 0.53
CIRBP-220ENST00000588917 NSG1A0A0A6YYJ2 146 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 OR2W5A6NFC9 320 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 GLOD5A6NK44 160 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 DYRK3O43781 588 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 DIAPH2O60879 1101 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 LDB3O75112 727 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 HPP00738 406 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 IFNA16P05015 189 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 FURINP09958 794 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 COX7A2P14406 83 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 SDC1P18827 310 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 EPHA3P29320 983 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 AQP5P55064 265 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 IGLV3-21P80748 117 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-220ENST00000588917 FOLH1Q04609 750 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 VWA5B1Q5TIE3 1220 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 NXNQ6DKJ4 435 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 R3HCC1LQ7Z5L2 792 aaKnown RBP18.35■□□□□ 0.53
CIRBP-220ENST00000588917 LIX1Q8N485 282 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 CDC26Q8NHZ8 85 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 STON2Q8WXE9 905 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 ANKRD9Q96BM1 317 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-220ENST00000588917 PRPF18Q99633 342 aaKnown RBP18.35■□□□□ 0.53
CIRBP-220ENST00000588917 WDR55Q9H6Y2 383 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-220ENST00000588917 ATP13A2Q9NQ11 1180 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 GIMAP4Q9NUV9 329 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 FAM53CQ9NYF3 392 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 TAS2R7Q9NYW3 318 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 CES1P1Q9UKY3 287 aa18.35■□□□□ 0.53
CIRBP-220ENST00000588917 FER1L5A0AVI2 2057 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 FLNBO75369 2602 aaKnown RBP18.34■□□□□ 0.53
CIRBP-220ENST00000588917 IGHV1-45A0A0A0MS14 117 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 GOLGA8QA0A0J9YX86 632 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 GOLGA8OA6NCC3 632 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 GOLGA8NF8WBI6 632 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 ERVH48-1M5A8F1 160 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 POLR3GO15318 223 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-220ENST00000588917 SLC35E2P0CK97 266 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 TNNI3P19429 210 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 CSNK2A2P19784 350 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-220ENST00000588917 PRPS1L1P21108 318 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 GALNSP34059 522 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 XKP51811 444 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 IRX1P78414 480 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-220ENST00000588917 TERF2Q15554 542 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 ELAVL1Q15717 326 aaKnown RBP18.34■□□□□ 0.53
CIRBP-220ENST00000588917 DEFB109BQ30KR1 87 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 SLC9B1Q4ZJI4 515 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 SFT2D3Q587I9 215 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 CLNKQ7Z7G1 428 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 ST13P4Q8IZP2 240 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms