RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 SNTB1Q13884 538 aaKnown RBP12.67□□□□□ -0.38
HDAC5-208ENST00000588419 WLSQ5T9L3 541 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 TRILQ7L0X0 811 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 CCDC25Q86WR0 208 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 DMRTC2Q8IXT2 367 aaPredicted RBP12.67□□□□□ -0.38
HDAC5-208ENST00000588419 GOLM1Q8NBJ4 401 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 ACBD4Q8NC06 268 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 BBOF1Q8ND07 529 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 FAM13CQ8NE31 585 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 SLC22A8Q8TCC7 542 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 ZNF721Q8TF20 911 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 ZNF473Q8WTR7 871 aaKnown RBP12.67□□□□□ -0.38
HDAC5-208ENST00000588419 ANKRD9Q96BM1 317 aaPredicted RBP12.67□□□□□ -0.38
HDAC5-208ENST00000588419 TTYH2Q9BSA4 534 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 MCMBPQ9BTE3 642 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 TBCDQ9BTW9 1192 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 CD244Q9BZW8 370 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 SEMA4BQ9NPR2 832 aaPredicted RBP12.67□□□□□ -0.38
HDAC5-208ENST00000588419 NUDT4Q9NZJ9 180 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 OPTCQ9UBM4 332 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 PTBP2Q9UKA9 531 aaKnown RBP12.67□□□□□ -0.38
HDAC5-208ENST00000588419 ATG4BQ9Y4P1 393 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 ANGPTL3Q9Y5C1 460 aa12.67□□□□□ -0.38
HDAC5-208ENST00000588419 TRGV5A0A0B4J1U4 118 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 A0A0G2JNJ9 132 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 TCRBV9S1A1TA0A576 114 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 OR14I1A6ND48 311 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 HRKO00198 91 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 GLI4P10075 376 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 IGFBP2P18065 325 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 STT3AP46977 705 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 ZFP36L2P47974 494 aaKnown RBP12.66□□□□□ -0.38
HDAC5-208ENST00000588419 HERVK_113P63132 956 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 ERVK-8P63133 956 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 PLIN5Q00G26 463 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 FOLH1Q04609 750 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 SLAMF1Q13291 335 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 TESK1Q15569 626 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 C1orf185Q5T7R7 199 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 CES4AQ5XG92 561 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 C18orf63Q68DL7 685 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 CHSY3Q70JA7 882 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 TBC1D1Q86TI0 1168 aaPredicted RBP12.66□□□□□ -0.38
HDAC5-208ENST00000588419 C9orf40Q8IXQ3 194 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 CLYBLQ8N0X4 340 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 PPM1NQ8N819 430 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 OR8K3Q8NH51 312 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 UBE2E3Q969T4 207 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 SARAFQ96BY9 339 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 WDR34Q96EX3 536 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 TREX2Q9BQ50 279 aaPredicted RBP12.66□□□□□ -0.38
HDAC5-208ENST00000588419 ERVK-6Q9BXR3 956 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 Q9UFV3 132 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 ERVK-19Q9WJR5 959 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 FAM215AQ9Y5M1 114 aa12.66□□□□□ -0.38
HDAC5-208ENST00000588419 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.66□□□□□ -0.38
HDAC5-208ENST00000588419 KIAA1549Q9HCM3 1950 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 AQP7O14520 342 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 KLK8O60259 260 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 OR10H2O60403 315 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 NADKO95544 446 aaPredicted RBP12.65□□□□□ -0.38
HDAC5-208ENST00000588419 IGHG3P01860 377 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 HOXD4P09016 255 aaPredicted RBP12.65□□□□□ -0.38
HDAC5-208ENST00000588419 SPRP35270 261 aaPredicted RBP12.65□□□□□ -0.38
HDAC5-208ENST00000588419 ARL1P40616 181 aaPredicted RBP12.65□□□□□ -0.38
HDAC5-208ENST00000588419 TRPC1P48995 793 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 TNFRSF17Q02223 184 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 C2orf54Q08AI8 447 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 SLC10A1Q14973 349 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 TMEM35AQ53FP2 167 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 CDKL4Q5MAI5 379 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 KHDRBS2Q5VWX1 349 aaKnown RBP12.65□□□□□ -0.38
HDAC5-208ENST00000588419 OR4C11Q6IEV9 310 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 DGAT2L6Q6ZPD8 337 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 C3orf62Q6ZUJ4 267 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 SLC29A4Q7RTT9 530 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 ZZZ3Q8IYH5 903 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 LIX1Q8N485 282 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 TEX9Q8N6V9 391 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 OR7G3Q8NG95 312 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 STAG3L4Q8TBR4 150 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 MRRFQ96E11 262 aaKnown RBP12.65□□□□□ -0.38
HDAC5-208ENST00000588419 CMTM7Q96FZ5 175 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 RBM18Q96H35 190 aaKnown RBP12.65□□□□□ -0.38
HDAC5-208ENST00000588419 SENP5Q96HI0 755 aaPredicted RBP12.65□□□□□ -0.38
HDAC5-208ENST00000588419 ART5Q96L15 291 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 SGCZQ96LD1 299 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 MTERF1Q99551 399 aaKnown RBP12.65□□□□□ -0.38
HDAC5-208ENST00000588419 CENPKQ9BS16 269 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 SLC6A15Q9H2J7 730 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 RPF2Q9H7B2 306 aaKnown RBP12.65□□□□□ -0.38
HDAC5-208ENST00000588419 SPRR3Q9UBC9 169 aa12.65□□□□□ -0.38
HDAC5-208ENST00000588419 BOKQ9UMX3 212 aaPredicted RBP12.65□□□□□ -0.38
HDAC5-208ENST00000588419 IQANK1A0A1B0GTG1 560 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 GLOD5A6NK44 160 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 FAM159BA6NKW6 160 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 K7EPI3 171 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 WDR1O75083 606 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 ALOX15P16050 662 aaPredicted RBP12.64□□□□□ -0.39
HDAC5-208ENST00000588419 ENDOUP21128 410 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms