RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 C1orf189Q5VU69 101 aa3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 CGB2Q6NT52 195 aa3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 GVQW1Q8N7I0 195 aa3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 VN1R17PQ8TDU5 208 aa3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 ESAMQ96AP7 390 aa3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 C16orf58Q96GQ5 468 aa3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 ERGIC2Q96RQ1 377 aa3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 SDHCQ99643 169 aaPredicted RBP3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 AP1M1Q9BXS5 423 aa3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 SLCO1C1Q9NYB5 712 aa3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 PLEK2Q9NYT0 353 aa3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 IL17CQ9P0M4 197 aa3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 NFKBIL1Q9UBC1 381 aaPredicted RBP3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 EIF3KQ9UBQ5 218 aaKnown RBP3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 Q9UF83 564 aa3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 TDRD6O60522 2096 aaKnown RBP3.1□□□□□ -1.91
CACNA1A-208ENST00000587451 IFIT3O14879 490 aaKnown RBP3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 CTDSPLO15194 276 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 CSDE1O75534 798 aaKnown RBP3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 CALCAP01258 141 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 MMP10P09238 476 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 GDF1P27539 372 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 MDH2P40926 338 aaKnown RBP3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 MAGEA9P43362 315 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 TNFRSF4P43489 277 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 SCN1BQ07699 218 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 OVGP1Q12889 678 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 SLC17A1Q14916 467 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 ACKR1Q16570 336 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 ODF2Q5BJF6 829 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 SNRNP48Q6IEG0 339 aaKnown RBP3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 PET117Q6UWS5 81 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 METTL23Q86XA0 190 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 THNSL1Q8IYQ7 743 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 CCDC197Q8NCU1 140 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 OR1K1Q8NGR3 316 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 MAGEB18Q96M61 343 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 SWAP70Q9UH65 585 aa3.09□□□□□ -1.91
CACNA1A-208ENST00000587451 PRAMEF12O95522 483 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 APBB3O95704 486 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 CENPBP07199 599 aaPredicted RBP3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 ZFYP08048 801 aaPredicted RBP3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 SNRPCP09234 159 aaKnown RBP3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 PGAM2P15259 253 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 GP5P40197 560 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 CCR4P51679 360 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 KIAA0040Q15053 153 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 PPP1R3AQ16821 1122 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 ANKRD55Q3KP44 614 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 AGAP6Q5VW22 663 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 CYP4V2Q6ZWL3 525 aaPredicted RBP3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 C17orf64Q86WR6 236 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 KLHL7Q8IXQ5 586 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 CCDC89Q8N998 374 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 GOLGA5Q8TBA6 731 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 AFAP1L1Q8TED9 768 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 RAB40CQ96S21 281 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 CUEDC2Q9H467 287 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 CIDEBQ9UHD4 219 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 GPR132Q9UNW8 380 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 PLEKHA6Q9Y2H5 1048 aa3.08□□□□□ -1.92
CACNA1A-208ENST00000587451 SYT7O43581 403 aa3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 CSO75390 466 aaKnown RBP3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 KRT6AP02538 564 aa3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 KRT6BP04259 564 aa3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 CCND3P30281 292 aaPredicted RBP3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 HMGCLP35914 325 aa3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 KRT6CP48668 564 aa3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 TFCP2Q12800 502 aa3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 DDI2Q5TDH0 399 aa3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 C2orf66Q6UXQ4 117 aa3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 FAM162AQ96A26 154 aa3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 MRPL24Q96A35 216 aaKnown RBP3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 NTNG2Q96CW9 530 aa3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 RASL10BQ96S79 203 aa3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 WWP1Q9H0M0 922 aa3.07□□□□□ -1.92
CACNA1A-208ENST00000587451 TRAV34A0A0B4J273 112 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 CCT8L1PA6NM43 557 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 GPAA1O43292 621 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 TSC22D2O75157 780 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 ANXA9O76027 345 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 LYPD3O95274 346 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 RPL27P61353 136 aaKnown RBP3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 MFGE8Q08431 387 aaPredicted RBP3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 MICAQ29983 383 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 CAPN13Q6MZZ7 669 aaPredicted RBP3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 TRAT1Q6PIZ9 186 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 UBQLNLQ8IYU4 475 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 Q8NFD4 153 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 SPATA18Q8TC71 538 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 CCT8L2Q96SF2 557 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 MRPL17Q9NRX2 175 aaKnown RBP3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 IMPAD1Q9NX62 359 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 VPS18Q9P253 973 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 SEC14L4Q9UDX3 406 aa3.06□□□□□ -1.92
CACNA1A-208ENST00000587451 MAGEB16A2A368 324 aa3.05□□□□□ -1.92
CACNA1A-208ENST00000587451 GTPBP10A4D1E9 387 aaKnown RBP3.05□□□□□ -1.92
CACNA1A-208ENST00000587451 SLC30A4O14863 429 aa3.05□□□□□ -1.92
CACNA1A-208ENST00000587451 TBCAO75347 108 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms