RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 ZSWIM3Q96MP5 696 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 AGAP4Q96P64 663 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 SORBS1Q9BX66 1292 aaKnown RBP16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 DYRK4Q9NR20 520 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 WNT6Q9Y6F9 365 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 MYO7AQ13402 2215 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 C5orf58C9J3I9 102 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 SSX4O60224 188 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 LILRB5O75023 590 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 SEMA7AO75326 666 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 FGBP02675 491 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 FEN1P39748 380 aaKnown RBP16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 SOX3P41225 446 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 NR4A2P43354 598 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 RPS26P62854 115 aaKnown RBP16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 NCF4Q15080 339 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 SEC23BQ15437 767 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 BCL7AQ4VC05 210 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 MEDAGQ5VYS4 303 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 TCTN3Q6NUS6 607 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 GDPGP1Q6ZNW5 385 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 VN1R5Q7Z5H4 357 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 KIAA0907Q7Z7F0 614 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 KRT73Q86Y46 540 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 HORMAD2Q8N7B1 307 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 GPR32P1Q8NGA4 272 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 UBE2E3Q969T4 207 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 NEURL3Q96EH8 262 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 RSPO3Q9BXY4 272 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 BARHL1Q9BZE3 327 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 A4GALTQ9NPC4 353 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 CCDC177Q9NQR7 707 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 CLEC2DQ9UHP7 191 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 ITM2BQ9Y287 266 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 H3BQ06 376 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 CCNKO75909 580 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 SLITRK5O94991 958 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 MFN2O95140 757 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 BCHEP06276 602 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 CKMT1AP12532 417 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 EPCAMP16422 314 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 ENDOUP21128 410 aaKnown RBP16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 BMPR1AP36894 532 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 SPHARQ15513 63 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 TMEM201Q5SNT2 666 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 SLX4IPQ5VYV7 408 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 TMIGD1Q6UXZ0 262 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 SPRED2Q7Z698 418 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 TRAPPC5Q8IUR0 188 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 SLC34A3Q8N130 599 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 ZNF486Q96H40 463 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 TMEM80Q96HE8 168 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 OR2AG1Q9H205 316 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 SMURF1Q9HCE7 757 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 EXOSC4Q9NPD3 245 aaKnown RBP16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 NPAP1Q9NZP6 1156 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 TBC1D24Q9ULP9 559 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 MGAT4BQ9UQ53 548 aa16.03■□□□□ 0.16
PRKCSH-205ENST00000587327 SOX14O95416 240 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 SOD1P00441 154 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 IGFBP1P08833 259 aaPredicted RBP16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 PSMA1P25786 263 aaKnown RBP16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 ELAVL4P26378 380 aaKnown RBP16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 RCVRNP35243 200 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 IFITM2Q01629 132 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 SAXO2Q658L1 398 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 TNFAIP8L2Q6P589 184 aaPredicted RBP16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 TMC5Q6UXY8 1006 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 SLC9B2Q86UD5 537 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 SPPL3Q8TCT6 385 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 HCAR2Q8TDS4 363 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 LRIG1Q96JA1 1093 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 OR2A14Q96R47 310 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 RACGAP1Q9H0H5 632 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 SLAMF7Q9NQ25 335 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 DNAJC27Q9NZQ0 273 aa16.02■□□□□ 0.16
PRKCSH-205ENST00000587327 CCDC88CQ9P219 2028 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 ANKDD1BA6NHY2 528 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 RGS5O15539 181 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 OR10H3O60404 316 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 CSO75390 466 aaKnown RBP16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 DDCP20711 480 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 CRYBB2P43320 205 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 DGKGP49619 791 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 OR2B6P58173 313 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 DCST1Q5T197 706 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 C12orf73Q69YU5 71 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 FBXO46Q6PJ61 603 aaPredicted RBP16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 TRMT11Q7Z4G4 463 aaKnown RBP16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 OR8H2Q8N162 312 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 VN1R2Q8NFZ6 395 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 VANGL1Q8TAA9 524 aaPredicted RBP16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 SETD6Q8TBK2 473 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 SETD7Q8WTS6 366 aaKnown RBP16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 TMCO6Q96DC7 493 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 DTD2Q96FN9 168 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 TMEM19Q96HH6 336 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 DHRS1Q96LJ7 313 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 NEK6Q9HC98 313 aa16.02■□□□□ 0.15
PRKCSH-205ENST00000587327 MARK1Q9P0L2 795 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms