RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-208	ENST00000587263	KCNJ9	Q92806	393 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	ALKBH8	Q96BT7	664 aa	Known RBP	13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	MFSD3	Q96ES6	412 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	HSPBAP1	Q96EW2	488 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	SCYL1	Q96KG9	808 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	SGPP1	Q9BX95	441 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	CCDC68	Q9H2F9	335 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	LIN28A	Q9H9Z2	209 aa	Known RBP	13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	ADAP2	Q9NPF8	381 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	INTS10	Q9NVR2	710 aa	Known RBP	13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	ZFP69B	Q9UJL9	534 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	ATG4B	Q9Y4P1	393 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	MPDZ	O75970	2070 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	RNF212B	A8MTL3	300 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	AHRR	A9YTQ3	701 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	EIF3F	O00303	357 aa	Predicted RBP	13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	EPPIN	O95925	133 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	HK2	P52789	917 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	RAB8A	P61006	207 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	ACSF3	Q4G176	576 aa	Predicted RBP	13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	POMZP3	Q6PJE2	187 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	OPN5	Q6U736	354 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	CES3	Q6UWW8	571 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	YTHDF3	Q7Z739	585 aa	Known RBP	13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	SCUBE1	Q8IWY4	988 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	CA13	Q8N1Q1	262 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	TMEM132C	Q8N3T6	1108 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	LIX1	Q8N485	282 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	OR4K1	Q8NGD4	311 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	DACH2	Q96NX9	599 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	SECISBP2	Q96T21	854 aa	Known RBP	13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	KIFC1	Q9BW19	673 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	SAYSD1	Q9NPB0	183 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	EIF2B3	Q9NR50	452 aa	Known RBP	13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	DHRS7	Q9Y394	339 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263	ZAN	Q9Y493	2812 aa		13.57	□□□□□ -0.24
RANBP3-208	ENST00000587263		A0A1W2PPR1	153 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	TLDC2	A0PJX2	215 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	CLDN4	O14493	209 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	NDUFAB1	O14561	156 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	EEF1E1	O43324	174 aa	Known RBP	13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	CRLF1	O75462	422 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	ACSL3	O95573	720 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	CCL3	P10147	92 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	MLN	P12872	115 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	NPPB	P16860	134 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	TPSB2	P20231	275 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	PPP2R1B	P30154	601 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	HPD	P32754	393 aa	Predicted RBP	13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	AHR	P35869	848 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	HNF4A	P41235	474 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	VPS41	P49754	854 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	ZNF136	P52737	540 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	HSD17B7	P56937	341 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	SARNP	P82979	210 aa	Known RBP	13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	BMPR2	Q13873	1038 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	TPSAB1	Q15661	275 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	ELAVL1	Q15717	326 aa	Known RBP	13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	LRRC8E	Q6NSJ5	796 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	EXOC3L1	Q86VI1	746 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	CILP2	Q8IUL8	1156 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	CPNE9	Q8IYJ1	553 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	GPATCH11	Q8N954	259 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	TRPV3	Q8NET8	790 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	NEIL3	Q8TAT5	605 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	PYROXD1	Q8WU10	500 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	CCT8L2	Q96SF2	557 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	ACKR4	Q9NPB9	350 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	PRTFDC1	Q9NRG1	225 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	QPCTL	Q9NXS2	382 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	PRDM4	Q9UKN5	801 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	BOK	Q9UMX3	212 aa	Predicted RBP	13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	MED16	Q9Y2X0	877 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	CLCA3P	Q9Y6N3	262 aa		13.56	□□□□□ -0.24
RANBP3-208	ENST00000587263	TRIM64	A6NGJ6	449 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	TRIM64B	A6NI03	449 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	ZSCAN5DP	P0CG00	497 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	PAM	P19021	973 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	MGAT1	P26572	445 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	SCTR	P47872	440 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	GUCY1A3	Q02108	690 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	SLC13A2	Q13183	592 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.55	□□□□□ -0.24	1e-15	■■■■□ 26.1
RANBP3-208	ENST00000587263	NEPRO	Q6NW34	567 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	MBOAT1	Q6ZNC8	495 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	PALM2	Q8IXS6	379 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	OR5L2	Q8NGL0	311 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	CD200R1	Q8TD46	325 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	DAZL	Q92904	295 aa	Known RBP	13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	ISL2	Q96A47	359 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	GPR21	Q99679	349 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	SLC6A15	Q9H2J7	730 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	ACSS3	Q9H6R3	686 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	XAB2	Q9HCS7	855 aa	Known RBP	13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	INTS9	Q9NV88	658 aa	Known RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms