RNA–Protein interactions for RNA: ENST00000586993.5

DDX39A-205, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-205ENST00000586993 FOXA1P55317 472 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 PKNOX1P55347 436 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 MLF1P58340 268 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 DNAJB13P59910 316 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 MRPL49Q13405 166 aaKnown RBP20.75■□□□□ 0.91
DDX39A-205ENST00000586993 SERTAD2Q14140 314 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 DGAT2L6Q6ZPD8 337 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 FRMD7Q6ZUT3 714 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 SRRM1Q8IYB3 904 aaKnown RBP20.75■□□□□ 0.91
DDX39A-205ENST00000586993 METTL6Q8TCB7 284 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 THAP3Q8WTV1 239 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-205ENST00000586993 SREK1Q8WXA9 508 aaKnown RBP20.75■□□□□ 0.91
DDX39A-205ENST00000586993 VMP1Q96GC9 406 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 TAAR6Q96RI8 345 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 HES7Q9BYE0 225 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 ROPN1BQ9BZX4 212 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-205ENST00000586993 ROPN1Q9HAT0 212 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-205ENST00000586993 BRF2Q9HAW0 419 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 TNFRSF12AQ9NP84 129 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 TIMM22Q9Y584 194 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 CLCA3PQ9Y6N3 262 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 ZGRF1Q86YA3 2104 aa20.75■□□□□ 0.91
DDX39A-205ENST00000586993 PRAMEF2O60811 474 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 VPS4BO75351 444 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 ESRRBO95718 433 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 BUD31P41223 144 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-205ENST00000586993 CLCN2P51788 898 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 SRSF1Q07955 248 aaKnown RBP eCLIP20.74■□□□□ 0.91
DDX39A-205ENST00000586993 PCLAFQ15004 111 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 RPUSD3Q6P087 351 aaKnown RBP20.74■□□□□ 0.91
DDX39A-205ENST00000586993 TMEM132CQ8N3T6 1108 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 CCDC63Q8NA47 563 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 OR14A16Q8NHC5 309 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 TANKQ92844 425 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 UTP23Q9BRU9 249 aaKnown RBP20.74■□□□□ 0.91
DDX39A-205ENST00000586993 TMEM109Q9BVC6 243 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 ACPTQ9BZG2 426 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 MID1IP1Q9NPA3 183 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 ADAM29Q9UKF5 820 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 VPS4AQ9UN37 437 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 STK38LQ9Y2H1 464 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 PLLPQ9Y342 182 aa20.74■□□□□ 0.91
DDX39A-205ENST00000586993 A0A1W2PS29 197 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 ARHGAP10A1A4S6 786 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 SYNDIG1LA6NDD5 238 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 TMEM200CA6NKL6 621 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 C17orf105B2RV13 164 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 PGRMC2O15173 223 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 SPAG7O75391 227 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 KRT6AP02538 564 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 KRT6BP04259 564 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 ENO1P06733 434 aaKnown RBP20.73■□□□□ 0.91
DDX39A-205ENST00000586993 CREB1P16220 341 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 HMOX2P30519 316 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 TLX1P31314 330 aaPredicted RBP20.73■□□□□ 0.91
DDX39A-205ENST00000586993 STT3AP46977 705 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 KRT6CP48668 564 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 NR6A1Q15406 480 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 OR1C1Q15619 314 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 C16orf47Q6ZP98 133 aaPredicted RBP20.73■□□□□ 0.91
DDX39A-205ENST00000586993 C10orf107Q8IVU9 208 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 MMP21Q8N119 569 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 C1orf52Q8N6N3 182 aaKnown RBP20.73■□□□□ 0.91
DDX39A-205ENST00000586993 SLC2A12Q8TD20 617 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 DOK4Q8TEW6 326 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 PPWD1Q96BP3 646 aaKnown RBP20.73■□□□□ 0.91
DDX39A-205ENST00000586993 OR8D2Q9GZM6 311 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 ABI3Q9P2A4 366 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 SLC17A7Q9P2U7 560 aa20.73■□□□□ 0.91
DDX39A-205ENST00000586993 HRKO00198 91 aa20.72■□□□□ 0.91
DDX39A-205ENST00000586993 NEURL1O76050 574 aa20.72■□□□□ 0.91
DDX39A-205ENST00000586993 SRSF11Q05519 484 aaKnown RBP20.72■□□□□ 0.91
DDX39A-205ENST00000586993 ZNF844Q08AG5 666 aa20.72■□□□□ 0.91
DDX39A-205ENST00000586993 CSTF3Q12996 717 aaKnown RBP20.72■□□□□ 0.91
DDX39A-205ENST00000586993 ZNF766Q5HY98 468 aa20.72■□□□□ 0.91
DDX39A-205ENST00000586993 CCNYL2Q5T2Q4 361 aa20.72■□□□□ 0.91
DDX39A-205ENST00000586993 SPINK14Q6IE38 97 aa20.72■□□□□ 0.91
DDX39A-205ENST00000586993 SCIMPQ6UWF3 145 aa20.72■□□□□ 0.91
DDX39A-205ENST00000586993 ZNF227Q86WZ6 799 aa20.72■□□□□ 0.91
DDX39A-205ENST00000586993 MORN4Q8NDC4 146 aa20.72■□□□□ 0.91
DDX39A-205ENST00000586993 CHTF18Q8WVB6 975 aa20.72■□□□□ 0.91
DDX39A-205ENST00000586993 DAZLQ92904 295 aaKnown RBP20.72■□□□□ 0.91
DDX39A-205ENST00000586993 LIN28AQ9H9Z2 209 aaKnown RBP20.72■□□□□ 0.91
DDX39A-205ENST00000586993 AHSPQ9NZD4 102 aa20.72■□□□□ 0.91
DDX39A-205ENST00000586993 VPS29Q9UBQ0 182 aa20.72■□□□□ 0.91
DDX39A-205ENST00000586993 SPTBN1Q01082 2364 aaKnown RBP20.72■□□□□ 0.91
DDX39A-205ENST00000586993 CLEC18AA5D8T8 446 aa20.71■□□□□ 0.91
DDX39A-205ENST00000586993 ULK1O75385 1050 aa20.71■□□□□ 0.91
DDX39A-205ENST00000586993 CBX6O95503 412 aa20.71■□□□□ 0.91
DDX39A-205ENST00000586993 GPR75O95800 540 aa20.71■□□□□ 0.91
DDX39A-205ENST00000586993 HSD3B1P14060 373 aa20.71■□□□□ 0.91
DDX39A-205ENST00000586993 ALOX15P16050 662 aaPredicted RBP20.71■□□□□ 0.91
DDX39A-205ENST00000586993 TNNI3P19429 210 aa20.71■□□□□ 0.91
DDX39A-205ENST00000586993 HSD3B2P26439 372 aa20.71■□□□□ 0.91
DDX39A-205ENST00000586993 MAPK12P53778 367 aa20.71■□□□□ 0.91
DDX39A-205ENST00000586993 PMP22Q01453 160 aa20.71■□□□□ 0.91
DDX39A-205ENST00000586993 HMGCS1Q01581 520 aa20.71■□□□□ 0.91
DDX39A-205ENST00000586993 OC90Q02509 493 aaPredicted RBP20.71■□□□□ 0.91
DDX39A-205ENST00000586993 NDUFAF5Q5TEU4 345 aa20.71■□□□□ 0.91
DDX39A-205ENST00000586993 LIPMQ5VYY2 423 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms