RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 PLIN5Q00G26 463 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 FOLH1Q04609 750 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 EEF1A2Q05639 463 aaKnown RBP13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 ATP1A4Q13733 1029 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 RPS6KA2Q15349 733 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 ST3GAL2Q16842 350 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 SLC9B1Q4ZJI4 515 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 FAM71E1Q6IPT2 247 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 DNAJB14Q8TBM8 379 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 STON2Q8WXE9 905 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 TSLPQ969D9 159 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 CHMP6Q96FZ7 201 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 MAELQ96JY0 434 aaKnown RBP13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 DGAT2Q96PD7 388 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 PRPF18Q99633 342 aaKnown RBP13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 LPAR4Q99677 370 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 CCDC28BQ9BUN5 200 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 ALOXE3Q9BYJ1 711 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 CPNE5Q9HCH3 593 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 ADAP2Q9NPF8 381 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 TCF7L2Q9NQB0 619 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 NECTIN3Q9NQS3 549 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 P4HTMQ9NXG6 502 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 ENTPD4Q9Y227 616 aa13.69□□□□□ -0.22
SCAMP4-209ENST00000585335 FREM2Q5SZK8 3169 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 LOC102723996A0A087X1L8 192 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 OR2W5A6NFC9 320 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 SOCS6O14544 535 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 UBDO15205 165 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 FGF17O60258 216 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 PRKRAO75569 313 aaKnown RBP13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 ERAL1O75616 437 aaKnown RBP13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 HPP00738 406 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 IDO1P14902 403 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 TNNI3P19429 210 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 PRPS1L1P21108 318 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 TACR1P25103 407 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 IDH3AP50213 366 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 GNGT1P63211 74 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 SFT2D3Q587I9 215 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 KIRREL2Q6UWL6 708 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 LANCL3Q6ZV70 420 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 NDUFAF7Q7L592 441 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 MAVSQ7Z434 540 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 SHISA5Q8N114 240 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 TMEM102Q8N9M5 508 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 CLEC1AQ8NC01 280 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 OR11G2Q8NGC1 345 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 CLHC1Q8NHS4 586 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 ANKRD9Q96BM1 317 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 C8orf44Q96CB5 159 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 PPCDCQ96CD2 204 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 MTERF3Q96E29 417 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 RBM18Q96H35 190 aaKnown RBP13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 RILPQ96NA2 401 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 TUBB6Q9BUF5 446 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 ZNF700Q9H0M5 742 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 REEP4Q9H6H4 257 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 PNO1Q9NRX1 252 aaKnown RBP13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 DCTN4Q9UJW0 460 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 FBXL4Q9UKA2 621 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 UTS2RQ9UKP6 389 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 TRIM33Q9UPN9 1127 aa13.68□□□□□ -0.22
SCAMP4-209ENST00000585335 IGHV1-45A0A0A0MS14 117 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 A0A0G2JND7 137 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 A0A1W2PQ72 361 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 ZNF195O14628 629 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 PGRMC2O15173 223 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 AKAP10O43572 662 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 G6PDP11413 515 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 ICAM2P13598 275 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 CSNK2A2P19784 350 aaPredicted RBP13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 NTSP30990 170 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 STT3AP46977 705 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 XKP51811 444 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 STX1BP61266 288 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 IRX1P78414 480 aaPredicted RBP13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 IGLV3-21P80748 117 aaPredicted RBP13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 ID2Q02363 134 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 TERF2Q15554 542 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 ELAVL1Q15717 326 aaKnown RBP13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 EXT1Q16394 746 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 GSTA3Q16772 222 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 DEFB109BQ30KR1 87 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 ATP1A1-AS1Q5TC04 95 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 IRAK1BP1Q5VVH5 260 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 PAPD4Q6PIY7 484 aaKnown RBP13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 TICAM1Q8IUC6 712 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 OR4N5Q8IXE1 308 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 ST13P4Q8IZP2 240 aaPredicted RBP13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 OR14A16Q8NHC5 309 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 DAZLQ92904 295 aaKnown RBP13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 GFM2Q969S9 779 aaKnown RBP13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 EXOSC8Q96B26 276 aaKnown RBP13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 THOC1Q96FV9 657 aaKnown RBP13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 ZNF764Q96H86 408 aaPredicted RBP13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 OR52B2Q96RD2 323 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 BBS4Q96RK4 519 aa13.67□□□□□ -0.22
SCAMP4-209ENST00000585335 ZBTB18Q99592 522 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms