RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 RPS6KA2Q15349 733 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 SFT2D3Q587I9 215 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 CES4AQ5XG92 561 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 FAM219BQ5XKK7 198 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 C18orf63Q68DL7 685 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 ACAD11Q709F0 780 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 NDUFAF7Q7L592 441 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 PPP1R32Q7Z5V6 425 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 ANKRD37Q7Z713 158 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 SAMD14Q8IZD0 417 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-215ENST00000584944 FAM9CQ8IZT9 166 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 OR4K14Q8NGD5 310 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 C8orf44Q96CB5 159 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 KLHL29Q96CT2 875 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 DGAT2Q96PD7 388 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 PELOQ9BRX2 385 aaKnown RBP13.02□□□□□ -0.33
TRAF4-215ENST00000584944 ZNF717Q9BY31 904 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-215ENST00000584944 C20orf27Q9GZN8 174 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 TUBB1Q9H4B7 451 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 CLMPQ9H6B4 373 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 ATP13A2Q9NQ11 1180 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 NOP53Q9NZM5 478 aaKnown RBP13.02□□□□□ -0.33
TRAF4-215ENST00000584944 KCMF1Q9P0J7 381 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 HAO1Q9UJM8 370 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 ENTPD4Q9Y227 616 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 DLGAP4Q9Y2H0 992 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 WBP11Q9Y2W2 641 aaKnown RBP13.02□□□□□ -0.33
TRAF4-215ENST00000584944 ASB4Q9Y574 426 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 HS3ST3B1Q9Y662 390 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 SEC16AO15027 2179 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 LSM1O15116 133 aaKnown RBP13.01□□□□□ -0.33
TRAF4-215ENST00000584944 LDB3O75112 727 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 ERAL1O75616 437 aaKnown RBP13.01□□□□□ -0.33
TRAF4-215ENST00000584944 WISP1O95388 367 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 HPP00738 406 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 IL3P08700 152 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 PRPH2P23942 346 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 ITGA3P26006 1051 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 HPCAL1P37235 193 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 ID2Q02363 134 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 KCNC4Q03721 635 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 C2orf80Q0P641 193 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 NFATC3Q12968 1075 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 AIMP2Q13155 320 aaKnown RBP13.01□□□□□ -0.33
TRAF4-215ENST00000584944 EXT1Q16394 746 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 GALNT18Q6P9A2 607 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 KIRREL2Q6UWL6 708 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 LANCL3Q6ZV70 420 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 IKBIPQ70UQ0 350 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 PLPP5Q8NEB5 264 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 OR11G2Q8NGC1 345 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 OR2T11Q8NH01 316 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 C16orf78Q8WTQ4 265 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 TSLPQ969D9 159 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 PRPF18Q99633 342 aaKnown RBP13.01□□□□□ -0.33
TRAF4-215ENST00000584944 TUBB6Q9BUF5 446 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 C1orf50Q9BV19 199 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 ALOXE3Q9BYJ1 711 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 ING2Q9H160 280 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 ZNF160Q9HCG1 818 aa13.01□□□□□ -0.33
TRAF4-215ENST00000584944 TEX10Q9NXF1 929 aaPredicted RBP13.01□□□□□ -0.33
TRAF4-215ENST00000584944 A8MUA0 341 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 SEC24DO94855 1032 aaPredicted RBP13□□□□□ -0.33
TRAF4-215ENST00000584944 GPR75O95800 540 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 ALPPP05187 535 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 TROVE2P10155 538 aaKnown RBP eCLIP13□□□□□ -0.33
TRAF4-215ENST00000584944 PRPS2P11908 318 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 LBPP18428 481 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 RPL3P39023 403 aaKnown RBP13□□□□□ -0.33
TRAF4-215ENST00000584944 CCL11P51671 97 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 GUCY1A3Q02108 690 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 FOLH1Q04609 750 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 TBR1Q16650 682 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 BTBD16Q32M84 506 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 RFTN2Q52LD8 501 aaPredicted RBP13□□□□□ -0.33
TRAF4-215ENST00000584944 XKR7Q5GH72 579 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 DCAF10Q5QP82 559 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 C6orf136Q5SQH8 315 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 MRM1Q6IN84 353 aaKnown RBP13□□□□□ -0.33
TRAF4-215ENST00000584944 PAPD4Q6PIY7 484 aaKnown RBP13□□□□□ -0.33
TRAF4-215ENST00000584944 Q6ZSR9 355 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 PRICKLE2Q7Z3G6 844 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 R3HCC1LQ7Z5L2 792 aaKnown RBP13□□□□□ -0.33
TRAF4-215ENST00000584944 OR4N5Q8IXE1 308 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 KBTBD2Q8IY47 623 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 DAZLQ92904 295 aaKnown RBP13□□□□□ -0.33
TRAF4-215ENST00000584944 TM4SF18Q96CE8 201 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 TSSK3Q96PN8 268 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 BBS4Q96RK4 519 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 ZNF700Q9H0M5 742 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 AKTIPQ9H8T0 292 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 MEAF6Q9HAF1 191 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 MYNNQ9NPC7 610 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 SLCO1B3Q9NPD5 702 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 ADAP2Q9NPF8 381 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 SIRT5Q9NXA8 310 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 COPS7AQ9UBW8 275 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 UTS2RQ9UKP6 389 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 MAPRE3Q9UPY8 281 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 PCDHA9Q9Y5H5 950 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms