RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 C17orf105B2RV13 164 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 H3BQF6 201 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 UBFD1O14562 309 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 MAN1A2O60476 641 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 VPS4BO75351 444 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 ERLIN1O75477 346 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 COX7A2P14406 83 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 CHN1P15882 459 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 TPP2P29144 1249 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 TNFSF10P50591 281 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 MAPK12P53778 367 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 FOXA1P55317 472 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 OC90Q02509 493 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 KCNC4Q03721 635 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 GALNT1Q10472 559 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 TBL3Q12788 808 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 ASPHQ12797 758 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 CEP85LQ5SZL2 805 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 SCIMPQ6UWF3 145 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 RPS19BP1Q86WX3 136 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 C1orf52Q8N6N3 182 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 GBP7Q8N8V2 638 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 APCDD1LQ8NCL9 501 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 C7orf57Q8NEG2 295 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 OR14A16Q8NHC5 309 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 TCP10LQ8TDR4 215 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 THAP3Q8WTV1 239 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 SNRNP40Q96DI7 357 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 ZIM3Q96PE6 472 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 NPAS2Q99743 824 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 ACPTQ9BZG2 426 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 RNF32Q9H0A6 362 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 TEX10Q9NXF1 929 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 ANKRD10Q9NXR5 420 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 SENP1Q9P0U3 644 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 VPS4AQ9UN37 437 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 COPG1Q9Y678 874 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 CNTRLQ7Z7A1 2325 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 WASHC1A8K0Z3 465 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 DYRK3O43781 588 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 OR10H2O60403 315 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 TRIM13O60858 407 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 GUCY1B2O75343 617 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 ALOX15P16050 662 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 CREB1P16220 341 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 ALDH3A1P30838 453 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 STT3AP46977 705 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 PLIN5Q00G26 463 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 HMGCS1Q01581 520 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 BTKQ06187 659 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 TUBA3CQ13748 450 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 IMPG1Q17R60 797 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 OR52E8Q6IFG1 317 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 TUBA3EQ6PEY2 450 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 LGI4Q8N135 537 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 MORN4Q8NDC4 146 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 PTPMT1Q8WUK0 201 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 SREK1Q8WXA9 508 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 UCN3Q969E3 161 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 PPWD1Q96BP3 646 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 C19orf60Q96EN9 201 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 RBM18Q96H35 190 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 UTP23Q9BRU9 249 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 MECRQ9BV79 373 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 GATA5Q9BWX5 397 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 OR8D2Q9GZM6 311 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 ASF1BQ9NVP2 202 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 COPS7AQ9UBW8 275 aa11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 ZNF223Q9UK11 482 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-218ENST00000582955 GCN1Q92616 2671 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 FCHO1O14526 889 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 PGRMC2O15173 223 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 PRAMEF2O60811 474 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 ZFAND5O76080 213 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 GPR75O95800 540 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 PIK3R1P27986 724 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 SERPINB3P29508 390 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 MLF1P58340 268 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 IGLV3-21P80748 117 aaPredicted RBP11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 ACSM2AQ08AH3 577 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 BIKQ13323 160 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 SPIN4Q56A73 249 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 SPDYAQ5MJ70 313 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 NDUFAF5Q5TEU4 345 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 ACSM2BQ68CK6 577 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 SLC2A12Q8TD20 617 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 CHTF18Q8WVB6 975 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 APIPQ96GX9 242 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 PELOQ9BRX2 385 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 CLMPQ9H6B4 373 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 AGPAT4Q9NRZ5 378 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 PPIEQ9UNP9 301 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 NTNG1Q9Y2I2 539 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 FIS1Q9Y3D6 152 aa11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 HELZ2Q9BYK8 2649 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-218ENST00000582955 GNG14A0A1W2PPG7 69 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 CTIFO43310 598 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 TYROBPO43914 113 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 PCDH7O60245 1069 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 DDAH2O95865 285 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms