RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CCDC160A6NGH7 325 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 M0QX08 132 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 BTN3A3O00478 584 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 KIF1CO43896 1103 aaKnown RBP21.46■■□□□ 1.03
CCDC47-204ENST00000582252 VIPP01282 170 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 GPC1P35052 558 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 ANXA11P50995 505 aaKnown RBP21.46■■□□□ 1.03
CCDC47-204ENST00000582252 PCBP3P57721 371 aaKnown RBP21.46■■□□□ 1.03
CCDC47-204ENST00000582252 TCEA2Q15560 299 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 SLC36A4Q6YBV0 504 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 C6orf120Q7Z4R8 191 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 NRROSQ86YC3 692 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 SETD9Q8NE22 299 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 PIK3C3Q8NEB9 887 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 NT5CQ8TCD5 201 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 GPBAR1Q8TDU6 330 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 SEMA3GQ9NS98 782 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 GIMAP4Q9NUV9 329 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 PDP1Q9P0J1 537 aaPredicted RBP21.46■■□□□ 1.03
CCDC47-204ENST00000582252 BLOC1S6Q9UL45 172 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 ENTPD4Q9Y227 616 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 CCDC163A0A0D9SF12 145 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 A0A1W2PPC4 97 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 SLC35G6P0C7Q6 338 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 CCT3P49368 545 aaKnown RBP21.46■■□□□ 1.03
CCDC47-204ENST00000582252 HLCSP50747 726 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 KDM4DQ6B0I6 523 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 BHLHB9Q6PI77 547 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 ASPGQ86U10 573 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 AMER3Q8N944 861 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 OR8K5Q8NH50 307 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 HDAC2Q92769 488 aaKnown RBP21.46■■□□□ 1.03
CCDC47-204ENST00000582252 TAMM41Q96BW9 452 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 THAP11Q96EK4 314 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 AMBRA1Q9C0C7 1298 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 TWSG1Q9GZX9 223 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 SIRT3Q9NTG7 399 aaPredicted RBP21.46■■□□□ 1.03
CCDC47-204ENST00000582252 C5AR2Q9P296 337 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 ASB4Q9Y574 426 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 ENTPD2Q9Y5L3 495 aa21.46■■□□□ 1.03
CCDC47-204ENST00000582252 THADAQ6YHU6 1953 aa21.45■■□□□ 1.02
CCDC47-204ENST00000582252 KIR2DS5A0A0G2JLQ3 304 aa21.45■■□□□ 1.02
CCDC47-204ENST00000582252 A0A0G2JNG1 304 aa21.45■■□□□ 1.02
CCDC47-204ENST00000582252 TMEM221A6NGB7 291 aa21.45■■□□□ 1.02
CCDC47-204ENST00000582252 URADA6NGE7 173 aa21.45■■□□□ 1.02
CCDC47-204ENST00000582252 KIR2DS3K7RE56 304 aa21.45■■□□□ 1.02
CCDC47-204ENST00000582252 M0R296 226 aa21.45■■□□□ 1.02
CCDC47-204ENST00000582252 DIRAS1O95057 198 aa21.45■■□□□ 1.02
CCDC47-204ENST00000582252 KIR2DS5Q14953 304 aa21.45■■□□□ 1.02
CCDC47-204ENST00000582252 TMEM64Q6YI46 380 aa21.45■■□□□ 1.02
CCDC47-204ENST00000582252 CEP68Q76N32 757 aa21.45■■□□□ 1.02
CCDC47-204ENST00000582252 MOAP1Q96BY2 351 aa21.45■■□□□ 1.02
CCDC47-204ENST00000582252 PRMT8Q9NR22 394 aaPredicted RBP21.45■■□□□ 1.02
CCDC47-204ENST00000582252 PNMA8BQ9ULN7 279 aaPredicted RBP21.45■■□□□ 1.02
CCDC47-204ENST00000582252 TRBV23OR9-2A0A075B6M9 112 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 OR2A25A4D2G3 310 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 BCKDKO14874 412 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 TNFSF14O43557 240 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 JRKO75564 520 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 OR6B1O95007 311 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 OPN1SWP03999 348 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 GSTT1P30711 240 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 CDK9P50750 372 aaKnown RBP21.44■■□□□ 1.02
CCDC47-204ENST00000582252 CDH15P55291 814 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 IQCCQ4KMZ1 466 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 ZNF691Q5VV52 312 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 FAM180BQ6P0A1 224 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 HORMAD2Q8N7B1 307 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 ATG16L2Q8NAA4 619 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 SFXN5Q8TD22 340 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 NCSTNQ92542 709 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 SLC35G5Q96KT7 338 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 AMDHD1Q96NU7 426 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 TMEM121BQ9BXQ6 578 aaPredicted RBP21.44■■□□□ 1.02
CCDC47-204ENST00000582252 RBM38Q9H0Z9 239 aaKnown RBP21.44■■□□□ 1.02
CCDC47-204ENST00000582252 GLIPR2Q9H4G4 154 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 VCX3AQ9NNX9 186 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 ACTR10Q9NZ32 417 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 HSPE1-MOB4S4R3N1 261 aa21.44■■□□□ 1.02
CCDC47-204ENST00000582252 MDC1Q14676 2089 aaKnown RBP21.44■■□□□ 1.02
CCDC47-204ENST00000582252 SNRNP200O75643 2136 aaKnown RBP21.44■■□□□ 1.02
CCDC47-204ENST00000582252 METTL12A8MUP2 240 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 PPM1DO15297 605 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 AHCYL1O43865 530 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 FESP07332 822 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 HOXB3P14651 431 aaPredicted RBP21.43■■□□□ 1.02
CCDC47-204ENST00000582252 RRM2P31350 389 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 TTKP33981 857 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 RYKP34925 604 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 BLKP51451 505 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 NCBP2P52298 156 aaKnown RBP eCLIP21.43■■□□□ 1.02
CCDC47-204ENST00000582252 RPL6Q02878 288 aaKnown RBP21.43■■□□□ 1.02
CCDC47-204ENST00000582252 KEAP1Q14145 624 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 RASSF5Q8WWW0 418 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 OR2A14Q96R47 310 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 KRT84Q9NSB2 600 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 APOBEC3BQ9UH17 382 aaKnown RBP21.43■■□□□ 1.02
CCDC47-204ENST00000582252 PSME2Q9UL46 239 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 RAB23Q9ULC3 237 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 GSAPA4D1B5 854 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms