RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 EHD3Q9NZN3 535 aa18.79■□□□□ 0.6
TOP3A-213ENST00000582230 CES1P1Q9UKY3 287 aa18.79■□□□□ 0.6
TOP3A-213ENST00000582230 EIF3LQ9Y262 564 aaKnown RBP18.79■□□□□ 0.6
TOP3A-213ENST00000582230 TCP11X1B4DZS4 312 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 PRPS2P11908 318 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 BCKDHAP12694 445 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 SDC1P18827 310 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 PIK3R1P27986 724 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 MDH1P40925 334 aaKnown RBP18.78■□□□□ 0.6
TOP3A-213ENST00000582230 ASMTP46597 345 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 ALDH9A1P49189 494 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 AP2B1P63010 937 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 ERVK-8P63133 956 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 C2orf80Q0P641 193 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 AIMP2Q13155 320 aaKnown RBP18.78■□□□□ 0.6
TOP3A-213ENST00000582230 TERF2Q15554 542 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 TBR1Q16650 682 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 IL23RQ5VWK5 629 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 FAM71E1Q6IPT2 247 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 PAPD4Q6PIY7 484 aaKnown RBP18.78■□□□□ 0.6
TOP3A-213ENST00000582230 LARP4Q71RC2 724 aaKnown RBP eCLIP18.78■□□□□ 0.6
TOP3A-213ENST00000582230 OR4N5Q8IXE1 308 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 UCN3Q969E3 161 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 RBM18Q96H35 190 aaKnown RBP18.78■□□□□ 0.6
TOP3A-213ENST00000582230 IMMP1LQ96LU5 166 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 PELOQ9BRX2 385 aaKnown RBP18.78■□□□□ 0.6
TOP3A-213ENST00000582230 CCDC134Q9H6E4 229 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 ZNF160Q9HCG1 818 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 ASIC5Q9NY37 505 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 NOP53Q9NZM5 478 aaKnown RBP18.78■□□□□ 0.6
TOP3A-213ENST00000582230 HEY2Q9UBP5 337 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 GIMAP2Q9UG22 337 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 USH1CQ9Y6N9 552 aa18.78■□□□□ 0.6
TOP3A-213ENST00000582230 IGHV3-20A0A0C4DH32 117 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 WASHC1A8K0Z3 465 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 SDHDO14521 159 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 ZNF195O14628 629 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 EDF1O60869 148 aaKnown RBP18.77■□□□□ 0.6
TOP3A-213ENST00000582230 IFNA16P05015 189 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 PCSK2P16519 638 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 LBPP18428 481 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 DDCP20711 480 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 TACR1P25103 407 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 PLIN5Q00G26 463 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 GUCY1A3Q02108 690 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 ID2Q02363 134 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 ELAVL1Q15717 326 aaKnown RBP18.77■□□□□ 0.6
TOP3A-213ENST00000582230 EXT1Q16394 746 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 SAMD14Q8IZD0 417 aaPredicted RBP18.77■□□□□ 0.6
TOP3A-213ENST00000582230 CDC26Q8NHZ8 85 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 DGAT2Q96PD7 388 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 WDR77Q9BQA1 342 aaPredicted RBP18.77■□□□□ 0.6
TOP3A-213ENST00000582230 MIEF1Q9NQG6 463 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 PNO1Q9NRX1 252 aaKnown RBP18.77■□□□□ 0.6
TOP3A-213ENST00000582230 NUP210LQ5VU65 1888 aa18.77■□□□□ 0.6
TOP3A-213ENST00000582230 CELSR3Q9NYQ7 3312 aa18.77■□□□□ 0.59
TOP3A-213ENST00000582230 ANKRD11Q6UB99 2663 aaPredicted RBP18.77■□□□□ 0.59
TOP3A-213ENST00000582230 SEC24DO94855 1032 aaPredicted RBP18.76■□□□□ 0.59
TOP3A-213ENST00000582230 SLC35E2P0CK97 266 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 COX7A2P14406 83 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 ALOX15P16050 662 aaPredicted RBP18.76■□□□□ 0.59
TOP3A-213ENST00000582230 GALNSP34059 522 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 STT3AP46977 705 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 XKP51811 444 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 SOX8P57073 446 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 PLAG1Q6DJT9 500 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 OGFOD2Q6N063 350 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 RIPOR1Q6ZS17 1223 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 ST13P4Q8IZP2 240 aaPredicted RBP18.76■□□□□ 0.59
TOP3A-213ENST00000582230 FAM9CQ8IZT9 166 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 MMP21Q8N119 569 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 LIX1Q8N485 282 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 ACTRT2Q8TDY3 377 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 MAELQ96JY0 434 aaKnown RBP18.76■□□□□ 0.59
TOP3A-213ENST00000582230 EGLN2Q96KS0 407 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 C1orf50Q9BV19 199 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 WDR55Q9H6Y2 383 aaPredicted RBP18.76■□□□□ 0.59
TOP3A-213ENST00000582230 TAS2R7Q9NYW3 318 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 BAIAP2L1Q9UHR4 511 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 UTS2RQ9UKP6 389 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 CLCA3PQ9Y6N3 262 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 ZNF780BQ9Y6R6 833 aa18.76■□□□□ 0.59
TOP3A-213ENST00000582230 SAGE2PA6NJ88 616 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 DYRK3O43781 588 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 OR10H2O60403 315 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 TNNI3P19429 210 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 CSNK2A2P19784 350 aaPredicted RBP18.75■□□□□ 0.59
TOP3A-213ENST00000582230 EPHA3P29320 983 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 VWA5B1Q5TIE3 1220 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 CPZQ66K79 652 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 EPGNQ6UW88 154 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 MAVSQ7Z434 540 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 R3HCC1LQ7Z5L2 792 aaKnown RBP18.75■□□□□ 0.59
TOP3A-213ENST00000582230 SPATA19Q7Z5L4 167 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 KBTBD2Q8IY47 623 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 OR14A16Q8NHC5 309 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 CEP70Q8NHQ1 597 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 M1APQ8TC57 530 aa18.75■□□□□ 0.59
TOP3A-213ENST00000582230 DAZLQ92904 295 aaKnown RBP18.75■□□□□ 0.59
TOP3A-213ENST00000582230 EXTL1Q92935 676 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms