RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	FAM109A	Q8N4B1	249 aa		10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	SRFBP1	Q8NEF9	429 aa	Known RBP	10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	OR7G3	Q8NG95	312 aa		10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	OR5L2	Q8NGL0	311 aa		10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	MRRF	Q96E11	262 aa	Known RBP	10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	SENP5	Q96HI0	755 aa	Predicted RBP	10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	UBXN10	Q96LJ8	280 aa		10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	TREX2	Q9BQ50	279 aa	Predicted RBP	10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	CNPPD1	Q9BV87	410 aa		10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ROGDI	Q9GZN7	287 aa		10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	IL1RL2	Q9HB29	575 aa		10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	GRHL1	Q9NZI5	618 aa		10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	NUDT4	Q9NZJ9	180 aa		10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	WHRN	Q9P202	907 aa		10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	OPTC	Q9UBM4	332 aa		10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ACAD8	Q9UKU7	415 aa		10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ATG4B	Q9Y4P1	393 aa		10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	PHF3	Q92576	2039 aa	Known RBP	10.75	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	LRRC14B	A6NHZ5	514 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	GLOD5	A6NK44	160 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114		K7EPI3	171 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	C1QA	P02745	245 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	SPR	P35270	261 aa	Predicted RBP	10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	MAN2A2	P49641	1150 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	HNRNPH2	P55795	449 aa	Known RBP	10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	IRF9	Q00978	393 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	FOXO1	Q12778	655 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	MYBPH	Q13203	477 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	SNTB1	Q13884	538 aa	Known RBP	10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	TESK1	Q15569	626 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	TBCC	Q15814	346 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	TMEM35A	Q53FP2	167 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	PIGG	Q5H8A4	983 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	GRTP1	Q5TC63	336 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	NDUFAF5	Q5TEU4	345 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	KHDRBS2	Q5VWX1	349 aa	Known RBP	10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	OR4C11	Q6IEV9	310 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	RGS9BP	Q6ZS82	235 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ACAD11	Q709F0	780 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	CHSY3	Q70JA7	882 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	TBC1D1	Q86TI0	1168 aa	Predicted RBP	10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ISCA2	Q86U28	154 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	LAS2	Q8IYD9	372 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	TEX9	Q8N6V9	391 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	GOLM1	Q8NBJ4	401 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	OR8K3	Q8NH51	312 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	HUS1B	Q8NHY5	278 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	STAG3L4	Q8TBR4	150 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	FBF1	Q8TES7	1133 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	NRGN	Q92686	78 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	UBE2E3	Q969T4	207 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	NXNL1	Q96CM4	212 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	CMTM7	Q96FZ5	175 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	JSRP1	Q96MG2	331 aa	Predicted RBP	10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	GAL3ST4	Q96RP7	486 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ATOH8	Q96SQ7	321 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	MTERF1	Q99551	399 aa	Known RBP	10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ZNF559	Q9BR84	538 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ERP44	Q9BS26	406 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	TTYH2	Q9BSA4	534 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	RPF2	Q9H7B2	306 aa	Known RBP	10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	IGSF5	Q9NSI5	407 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	FAM215A	Q9Y5M1	114 aa		10.74	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	HIVEP1	P15822	2718 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114		A0A0G2JNJ9	132 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	SYNDIG1L	A6NDD5	238 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	FAM187A	A6NFU0	413 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	FIGNL2	A6NMB9	653 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	PLPP1	O14494	284 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	BCKDK	O14874	412 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	EIF3H	O15372	352 aa	Known RBP eCLIP	10.73	□□□□□ -0.69	3e-7	■■□□□ 13.1
CDK5RAP3-223	ENST00000582114	KERA	O60938	352 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	NADK	O95544	446 aa	Predicted RBP	10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	IGHG3	P01860	377 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	LTA4H	P09960	611 aa	Known RBP	10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	RFPL3S	P0C7P2	107 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	GLI4	P10075	376 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ENDOU	P21128	410 aa	Known RBP	10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ADH7	P40394	386 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	CASP2	P42575	452 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	STT3A	P46977	705 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	PLTP	P55058	493 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	RIPPLY3	P57055	190 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	RPS13	P62277	151 aa	Known RBP	10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	HERVK_113	P63132	956 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ERVK-8	P63133	956 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	KCNJ2	P63252	427 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	PLIN5	Q00G26	463 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	TNFRSF17	Q02223	184 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ILF2	Q12905	390 aa	Known RBP	10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ZNF267	Q14586	743 aa	Predicted RBP	10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	SLC10A1	Q14973	349 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	TRADD	Q15628	312 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ZNF791	Q3KP31	576 aa	Predicted RBP	10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	DEPDC1	Q5TB30	811 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	RTL6	Q6ICC9	239 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	GRHL2	Q6ISB3	625 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	B3GNT6	Q6ZMB0	384 aa		10.73	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	GPR180	Q86V85	440 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms