RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 OASLQ15646 514 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 ETFDHQ16134 617 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 TOR1AIP1Q5JTV8 583 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 LRRC8EQ6NSJ5 796 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 ZNF549Q6P9A3 640 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 CLNKQ7Z7G1 428 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 ADGRE4PQ86SQ3 457 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 KIAA1328Q86T90 577 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 OR10G3Q8NGC4 313 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 GABPB2Q8TAK5 448 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 ZNF721Q8TF20 911 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 SLC5A11Q8WWX8 675 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 ALKBH8Q96BT7 664 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 ZNF597Q96LX8 424 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 JSRP1Q96MG2 331 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 UCN2Q96RP3 112 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 TM9SF2Q99805 663 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 PIGQQ9BRB3 760 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 DOHHQ9BU89 302 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 REG4Q9BYZ8 158 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 AMBRA1Q9C0C7 1298 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 ACBD3Q9H3P7 528 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 KLHL28Q9NXS3 571 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 BFARQ9NZS9 450 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 PACSIN3Q9UKS6 424 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 CAPN6Q9Y6Q1 641 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 SVEP1Q4LDE5 3571 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 A8MV72 311 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 C17orf105B2RV13 164 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 AP3B1O00203 1094 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 IPO7O95373 1038 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 FBXO45P0C2W1 286 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 SOX18P35713 384 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 DHX9Q08211 1270 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 CLEC12BQ2HXU8 276 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 TBCELQ5QJ74 424 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 DUPD1Q68J44 220 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 NEPROQ6NW34 567 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 CES3Q6UWW8 571 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 FAM47BQ8NA70 645 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 NEIL2Q969S2 332 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 GAL3ST3Q96A11 431 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 CALR3Q96L12 384 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 GPR21Q99679 349 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 ALOXE3Q9BYJ1 711 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 PELI2Q9HAT8 420 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 COPS7AQ9UBW8 275 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 CDC42EP3Q9UKI2 254 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 SLC6A5Q9Y345 797 aa12.63□□□□□ -0.39
CSNK1D-219ENST00000581660 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 MSTNO14793 375 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 TRAPPC6AO75865 159 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 TNFSF13O75888 250 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 SIX3O95343 332 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 ETHE1O95571 254 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 IFNB1P01574 187 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 IGKV3-11P04433 115 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 CYP4B1P13584 511 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 CCKARP32238 428 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 RPL22P35268 128 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 CPOXP36551 454 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 STXBP1P61764 594 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 FAM27E3Q08E93 113 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 GAB1Q13480 694 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 VEZF1Q14119 521 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 CSHL1Q14406 222 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 GAS2L3Q86XJ1 694 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 C9orf40Q8IXQ3 194 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 UBL4BQ8N7F7 174 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 C1orf54Q8WWF1 131 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 SLC44A1Q8WWI5 657 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 WNT2BQ93097 391 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 ABTB1Q969K4 478 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 PYCR2Q96C36 320 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 INTS12Q96CB8 462 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 FAR2Q96K12 515 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 QRFPRQ96P65 431 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 CSF3RQ99062 836 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 BAG1Q99933 345 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 MED18Q9BUE0 208 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 SYBUQ9NX95 663 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 PSD3Q9NYI0 1048 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 FETUBQ9UGM5 382 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 SOX13Q9UN79 622 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 C15orf41Q9Y2V0 281 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 COMMD10Q9Y6G5 202 aa12.62□□□□□ -0.39
CSNK1D-219ENST00000581660 B3GALT2O43825 422 aa12.61□□□□□ -0.39
CSNK1D-219ENST00000581660 ACSL3O95573 720 aa12.61□□□□□ -0.39
CSNK1D-219ENST00000581660 ZSCAN5DPP0CG00 497 aa12.61□□□□□ -0.39
CSNK1D-219ENST00000581660 CPN1P15169 458 aa12.61□□□□□ -0.39
CSNK1D-219ENST00000581660 SERPINB3P29508 390 aa12.61□□□□□ -0.39
CSNK1D-219ENST00000581660 CD79BP40259 229 aa12.61□□□□□ -0.39
CSNK1D-219ENST00000581660 STX4Q12846 297 aa12.61□□□□□ -0.39
CSNK1D-219ENST00000581660 SNX1Q13596 522 aa12.61□□□□□ -0.39
CSNK1D-219ENST00000581660 SERTAD2Q14140 314 aa12.61□□□□□ -0.39
CSNK1D-219ENST00000581660 EFTUD2Q15029 972 aaKnown RBP eCLIP12.61□□□□□ -0.393e-6■■□□□ 12.6
CSNK1D-219ENST00000581660 NTRK2Q16620 822 aa12.61□□□□□ -0.39
CSNK1D-219ENST00000581660 FNDC7Q5VTL7 733 aa12.61□□□□□ -0.39
CSNK1D-219ENST00000581660 ARMC3Q5W041 872 aa12.61□□□□□ -0.39
CSNK1D-219ENST00000581660 ZNF470Q6ECI4 717 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms