RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 GDF3Q9NR23 364 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 ACOXLQ9NUZ1 547 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 ANO10Q9NW15 660 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 TECRQ9NZ01 308 aaKnown RBP3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 IL19Q9UHD0 177 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 MUTYHQ9UIF7 546 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 FGD5Q6ZNL6 1462 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 TRBV2A0A0J9YWF9 115 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 SLC9B1P1A6NJY1 282 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 EEF2KO00418 725 aaKnown RBP3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 TRAFD1O14545 582 aaPredicted RBP3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 DCXO43602 365 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 KIAA0513O60268 411 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 SNAP91O60641 907 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 ANXA9O76027 345 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 AHCYP23526 432 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 CRYBA2P53672 197 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 RPL27P61353 136 aaKnown RBP3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 FKBP3Q00688 224 aaKnown RBP3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 ZNF146Q15072 292 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 TRADDQ15628 312 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 ECSCRQ19T08 205 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 MS4A18Q3C1V0 323 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 MPPE1Q53F39 396 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 C2CD6Q53TS8 623 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 DOK6Q6PKX4 331 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 LYG1Q8N1E2 194 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 OR52E1Q8NGJ3 308 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 OR6F1Q8NGZ6 308 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 PCNPQ8WW12 178 aaKnown RBP3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 TCP11Q8WWU5 503 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 MRPL24Q96A35 216 aaKnown RBP3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 GPR137Q96N19 417 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 RAB40CQ96S21 281 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 DDX47Q9H0S4 455 aaKnown RBP3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 ABCG8Q9H221 673 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 CARD9Q9H257 536 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 SYTL2Q9HCH5 934 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 FAM153AQ9UHL3 310 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 TSPAN16Q9UKR8 245 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 RPH3AQ9Y2J0 694 aaPredicted RBP3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 RNF215Q9Y6U7 377 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 KIF7Q2M1P5 1343 aa3.87□□□□□ -1.79
SMCHD1-205ENST00000581383 COL2A1P02458 1487 aaPredicted RBP3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 YJEFN3A6XGL0 299 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 A8MXK9 166 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 NEDD8-MDP1E9PL57 170 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 SLC4A1P02730 911 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 PCP11498 1178 aaKnown RBP3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 OXTRP30559 389 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 LIMK2P53671 638 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 SLC12A3P55017 1021 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 HSPA14Q0VDF9 509 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 WASHC5Q12768 1159 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 P2RY14Q15391 338 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 DCAF12Q5T6F0 453 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 RTL6Q6ICC9 239 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 TATDN1Q6P1N9 297 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 ADAMTSL2Q86TH1 951 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 FAM131BQ86XD5 332 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 KRTAP7-1Q8IUC3 87 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 BATF2Q8N1L9 274 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 PARP8Q8N3A8 854 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 TMEM185AQ8NFB2 350 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 OR8H1Q8NGG4 311 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 OR6M1Q8NGM8 313 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 SPPL2AQ8TCT8 520 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 MIPOL1Q8TD10 442 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 C11orf52Q96A22 123 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 SLCO4A1Q96BD0 722 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 SLC45A3Q96JT2 553 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 RPGRIP1Q96KN7 1286 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 PKP2Q99959 881 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 VGLL1Q99990 258 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 JPH2Q9BR39 696 aaPredicted RBP3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 ZNF577Q9BSK1 485 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 LRRC61Q9BV99 259 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 TRIM15Q9C019 465 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 XPO4Q9C0E2 1151 aaKnown RBP3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 TNMDQ9H2S6 317 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 NMUR1Q9HB89 426 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 COPS7AQ9UBW8 275 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 TRIM10Q9UDY6 481 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 NARFQ9UHQ1 456 aa3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 DIMT1Q9UNQ2 313 aaKnown RBP3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 NIP7Q9Y221 180 aaKnown RBP eCLIP3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 MRPS2Q9Y399 296 aaKnown RBP3.86□□□□□ -1.79
SMCHD1-205ENST00000581383 LOC390937A0A1W2PQ73 354 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 IGLON5A6NGN9 336 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 ARHGEF33A8MVX0 844 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 EPM2AB3EWF7 344 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 E9PQ18 207 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 HTATSF1O43719 755 aaKnown RBP3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 CSDE1O75534 798 aaKnown RBP3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 REC8O95072 547 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 POP4O95707 220 aaKnown RBP3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 FHP07954 510 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 MARCKSP29966 332 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 CAPGP40121 348 aa3.85□□□□□ -1.79
SMCHD1-205ENST00000581383 ZFP36L2P47974 494 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms