RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 SORDQ00796 357 aa17.56■□□□□ 0.4
NDEL1-209ENST00000580738 CRYZQ08257 329 aaKnown RBP17.56■□□□□ 0.4
NDEL1-209ENST00000580738 ADPRMQ3LIE5 342 aa17.56■□□□□ 0.4
NDEL1-209ENST00000580738 Q5PR19 223 aa17.56■□□□□ 0.4
NDEL1-209ENST00000580738 ABHD17CQ6PCB6 329 aa17.56■□□□□ 0.4
NDEL1-209ENST00000580738 C9orf40Q8IXQ3 194 aa17.56■□□□□ 0.4
NDEL1-209ENST00000580738 GPATCH11Q8N954 259 aa17.56■□□□□ 0.4
NDEL1-209ENST00000580738 TTLQ8NG68 377 aa17.56■□□□□ 0.4
NDEL1-209ENST00000580738 SPACA9Q96E40 222 aaPredicted RBP17.56■□□□□ 0.4
NDEL1-209ENST00000580738 WDR83Q9BRX9 315 aaKnown RBP17.56■□□□□ 0.4
NDEL1-209ENST00000580738 QPCTLQ9NXS2 382 aa17.56■□□□□ 0.4
NDEL1-209ENST00000580738 COPS7AQ9UBW8 275 aa17.56■□□□□ 0.4
NDEL1-209ENST00000580738 CHCHD2Q9Y6H1 151 aaPredicted RBP17.56■□□□□ 0.4
NDEL1-209ENST00000580738 KIAA1549Q9HCM3 1950 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 HIVEP2P31629 2446 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 CDC7O00311 574 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 SMAD7O15105 426 aaKnown RBP17.55■□□□□ 0.4
NDEL1-209ENST00000580738 ARHGEF9O43307 516 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 CLEC3AO75596 197 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 GNAZP19086 355 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 PTMSP20962 102 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 SERTAD2Q14140 314 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 TRIM40Q6P9F5 258 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 FAM13CQ8NE31 585 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 OR10G3Q8NGC4 313 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 NUBPLQ8TB37 319 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 ANKRD9Q96BM1 317 aaPredicted RBP17.55■□□□□ 0.4
NDEL1-209ENST00000580738 SENP5Q96HI0 755 aaPredicted RBP17.55■□□□□ 0.4
NDEL1-209ENST00000580738 PRDM7Q9NQW5 492 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 JKAMPQ9P055 326 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 ADAM21Q9UKJ8 722 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 VWA7Q9Y334 891 aa17.55■□□□□ 0.4
NDEL1-209ENST00000580738 HRKO00198 91 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 WDR47O94967 919 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 GOSR1O95249 250 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 PGAM1P18669 254 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 GDF1P27539 372 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 CXCR5P32302 372 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 RCN2Q14257 317 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 NSUN5P2Q63ZY6 315 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 P3H2Q8IVL5 708 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 CNTN4Q8IWV2 1026 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 OR4N5Q8IXE1 308 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 RASGEF1CQ8N431 466 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 SLC22A8Q8TCC7 542 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 HSPBAP1Q96EW2 488 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 PDLIM5Q96HC4 596 aaKnown RBP17.54■□□□□ 0.4
NDEL1-209ENST00000580738 F2RL3Q96RI0 385 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 MAPKAP1Q9BPZ7 522 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 COPS7BQ9H9Q2 264 aaPredicted RBP17.54■□□□□ 0.4
NDEL1-209ENST00000580738 CNIH4Q9P003 139 aa17.54■□□□□ 0.4
NDEL1-209ENST00000580738 CNOT11Q9UKZ1 510 aaKnown RBP17.54■□□□□ 0.4
NDEL1-209ENST00000580738 NPEPPSL1A6NEC2 478 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 ANKDD1BA6NHY2 528 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 INAFM1C9JVW0 142 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 BANF1O75531 89 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 C1QAP02745 245 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 IGKV3-11P04433 115 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 CTSSP25774 331 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 DGAT2L6Q6ZPD8 337 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 UBE3DQ7Z6J8 389 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 KRT78Q8N1N4 520 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 NAT8LQ8N9F0 302 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 DOK4Q8TEW6 326 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 PPWD1Q96BP3 646 aaKnown RBP17.53■□□□□ 0.4
NDEL1-209ENST00000580738 Q96MF0 132 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 TRIB1Q96RU8 372 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 EGFL8Q99944 293 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 DOHHQ9BU89 302 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 PRDM14Q9GZV8 571 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 NT5DC2Q9H857 520 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 ZNF490Q9ULM2 529 aaPredicted RBP17.53■□□□□ 0.4
NDEL1-209ENST00000580738 CAMK2AQ9UQM7 478 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 SLC6A5Q9Y345 797 aa17.53■□□□□ 0.4
NDEL1-209ENST00000580738 PRAMEF4O60810 478 aa17.52■□□□□ 0.4
NDEL1-209ENST00000580738 TRIM3O75382 744 aaPredicted RBP17.52■□□□□ 0.4
NDEL1-209ENST00000580738 TRAPPC6AO75865 159 aa17.52■□□□□ 0.4
NDEL1-209ENST00000580738 ACSL3O95573 720 aa17.52■□□□□ 0.4
NDEL1-209ENST00000580738 FBXO45P0C2W1 286 aa17.52■□□□□ 0.4
NDEL1-209ENST00000580738 GSTM2P28161 218 aa17.52■□□□□ 0.4
NDEL1-209ENST00000580738 TBL3Q12788 808 aaKnown RBP17.52■□□□□ 0.4
NDEL1-209ENST00000580738 PRAMEF9Q5VWM5 478 aa17.52■□□□□ 0.4
NDEL1-209ENST00000580738 ZNF793Q6ZN11 406 aa17.52■□□□□ 0.4
NDEL1-209ENST00000580738 SLC15A4Q8N697 577 aa17.52■□□□□ 0.4
NDEL1-209ENST00000580738 ZNF592Q92610 1267 aa17.52■□□□□ 0.4
NDEL1-209ENST00000580738 DACH2Q96NX9 599 aa17.52■□□□□ 0.4
NDEL1-209ENST00000580738 LYRM4Q9HD34 91 aa17.52■□□□□ 0.4
NDEL1-209ENST00000580738 MBD3L4A6NDZ8 208 aaPredicted RBP17.51■□□□□ 0.39
NDEL1-209ENST00000580738 MBD3L3A6NE82 208 aaPredicted RBP17.51■□□□□ 0.39
NDEL1-209ENST00000580738 MBD3L5A6NJ08 208 aaPredicted RBP17.51■□□□□ 0.39
NDEL1-209ENST00000580738 CD8B2A6NJW9 211 aa17.51■□□□□ 0.39
NDEL1-209ENST00000580738 FGF17O60258 216 aa17.51■□□□□ 0.39
NDEL1-209ENST00000580738 OPRM1P35372 400 aa17.51■□□□□ 0.39
NDEL1-209ENST00000580738 SLC6A12P48065 614 aa17.51■□□□□ 0.39
NDEL1-209ENST00000580738 CDKL1Q00532 357 aa17.51■□□□□ 0.39
NDEL1-209ENST00000580738 DCST1Q5T197 706 aa17.51■□□□□ 0.39
NDEL1-209ENST00000580738 VASNQ6EMK4 673 aa17.51■□□□□ 0.39
NDEL1-209ENST00000580738 PM20D2Q8IYS1 436 aa17.51■□□□□ 0.39
NDEL1-209ENST00000580738 MBD3L2Q8NHZ7 208 aaPredicted RBP17.51■□□□□ 0.39
NDEL1-209ENST00000580738 GABPB2Q8TAK5 448 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms