RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 BUD31P41223 144 aaPredicted RBP13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 SSR2P43308 183 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 MAGEA12P43365 314 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 SERPINB8P50452 374 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 MRPS25P82663 173 aaKnown RBP13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 PIGGQ5H8A4 983 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 SYT10Q6XYQ8 523 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 GPR180Q86V85 440 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 CCDC25Q86WR0 208 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 OR2M7Q8NG81 312 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 ZNF721Q8TF20 911 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 ASB5Q8WWX0 329 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 NXNL1Q96CM4 212 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 RBM18Q96H35 190 aaKnown RBP13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 NTMT1Q9BV86 223 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 ZNF717Q9BY31 904 aaPredicted RBP13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 RPF2Q9H7B2 306 aaKnown RBP13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 SH2D2AQ9NP31 389 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 SNX15Q9NRS6 342 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 COQ3Q9NZJ6 369 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 NINQ8N4C6 2090 aa13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 ANKHD1Q8IWZ3 2542 aaKnown RBP13.44□□□□□ -0.26
SMARCE1-216ENST00000580419 ARHGAP10A1A4S6 786 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 STX16-NPEPL1H3BU86 382 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 PLPP1O14494 284 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 STX16O14662 325 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 PROM1O43490 865 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 PRKNO60260 465 aaPredicted RBP13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 SUSD5O60279 629 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 FAM155BO75949 473 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 TGFB1P01137 390 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 ALDOAP04075 364 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 RBP1P09455 135 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 CAPN3P20807 821 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 CPN2P22792 545 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 ELAVL4P26378 380 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 GRNP28799 593 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 PTGER1P34995 402 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 SERPINB9P50453 376 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 PLIN5Q00G26 463 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 TNFRSF17Q02223 184 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 SLAMF1Q13291 335 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 WHAMMP3Q1A5X7 153 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 MROH9Q5TGP6 573 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 C8orf74Q6P047 294 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 ACAD11Q709F0 780 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 TEX9Q8N6V9 391 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 MYRIPQ8NFW9 859 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 WDR20Q8TBZ3 569 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 SLC44A1Q8WWI5 657 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 SENP5Q96HI0 755 aaPredicted RBP13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 TEP1Q99973 2627 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 TRIM8Q9BZR9 551 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 TSPAN10Q9H1Z9 355 aaPredicted RBP13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 IL1RL2Q9HB29 575 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 SLC24A3Q9HC58 644 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 QPCTLQ9NXS2 382 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 MTRF1LQ9UGC7 380 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 ZNF180Q9UJW8 692 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 ADAM29Q9UKF5 820 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 ANGPTL3Q9Y5C1 460 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 CELSR1Q9NYQ6 3014 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 F8P00451 2351 aa13.43□□□□□ -0.26
SMARCE1-216ENST00000580419 A0A096LPK6 155 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 A0A0A6YYD5 115 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 A0A1B0GTH9 108 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 ANKRD33BA6NCL7 494 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 BCKDKO14874 412 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 HS6ST1O60243 411 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 LDB3O75112 727 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 OR6B1O95007 311 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 GPR75O95800 540 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 TYK2P29597 1187 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 SOX3P41225 446 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 RAP1GDS1P52306 607 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 FOXO1Q12778 655 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 TRADDQ15628 312 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 TSNAXIP1Q2TAA8 658 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 ZNF791Q3KP31 576 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 GGTA1PQ4G0N0 100 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 GLE1Q53GS7 698 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 FBXO48Q5FWF7 155 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 CLNKQ7Z7G1 428 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 LCA5Q86VQ0 697 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 FAM109AQ8N4B1 249 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 MMGT1Q8N4V1 131 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 SLC22A8Q8TCC7 542 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 PAQR8Q8TEZ7 354 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 KCTD4Q8WVF5 259 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 SCYL1Q96KG9 808 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 DGAT2Q96PD7 388 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 OR8D2Q9GZM6 311 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 IPPKQ9H8X2 491 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 ACTR8Q9H981 624 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 SACM1LQ9NTJ5 587 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 DEPPQ9NTK1 212 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 CNIH4Q9P003 139 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 ASB4Q9Y574 426 aa13.42□□□□□ -0.26
SMARCE1-216ENST00000580419 IKBKGQ9Y6K9 419 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms