RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 PRMT2P55345 433 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 CLDN15P56746 228 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 TMPRSS3P57727 454 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 TAS2R38P59533 333 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 HERV-K104P63124 156 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 FKBP1BP68106 108 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 HSF1Q00613 529 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 CRYZQ08257 329 aaKnown RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 DNAJC3Q13217 504 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 BTG3Q14201 252 aaPredicted RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 SELPLGQ14242 412 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 RFTN1Q14699 578 aaPredicted RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 NONOQ15233 471 aaKnown RBP eCLIP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 TRIP10Q15642 601 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 SMTNL2Q2TAL5 461 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 CERKLQ49MI3 558 aaPredicted RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 AGKQ53H12 422 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 ARMCX4Q5H9R4 360 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 PPP6R3Q5H9R7 873 aaPredicted RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 EARS2Q5JPH6 523 aaKnown RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 RABGAP1LQ5R372 815 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 TAF3Q5VWG9 929 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 SUSD4Q5VX71 490 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 ASPHD2Q6ICH7 369 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 ZNF770Q6IQ21 691 aaPredicted RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 RGMBQ6NW40 437 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 NIPAL3Q6P499 406 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 CBLN3Q6UW01 205 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 PLXDC2Q6UX71 529 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 CENPUQ71F23 418 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 BZW1Q7L1Q6 419 aaKnown RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 SHFQ7M4L6 423 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 C16orf62Q7Z3J2 963 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 TRMT11Q7Z4G4 463 aaKnown RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 YRDCQ86U90 279 aaKnown RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 PALB2Q86YC2 1186 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 CNGA4Q8IV77 575 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 FAM114A1Q8IWE2 563 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 GPR137CQ8N3F9 429 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 DCLK2Q8N568 766 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 C1orf52Q8N6N3 182 aaKnown RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 BMPERQ8N8U9 685 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 ENGASEQ8NFI3 743 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 OR9K2Q8NGE7 335 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 ARRDC2Q8TBH0 407 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 TMEM163Q8TC26 289 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 SUN5Q8TC36 379 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 TRIB2Q92519 343 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 PHYHIPQ92561 330 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 HIST1H2ACQ93077 130 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 LGALS12Q96DT0 336 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 FAM71F1Q96KD3 344 aaPredicted RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 IFT74Q96LB3 600 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 RAB40CQ96S21 281 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 MTERF1Q99551 399 aaKnown RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 CHP1Q99653 195 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 PRMT1Q99873 361 aaKnown RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 HAUS8Q9BT25 410 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 TMEM43Q9BTV4 400 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 MMTAG2Q9BU76 263 aaKnown RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 MSTO1Q9BUK6 570 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 SLA2Q9H6Q3 261 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 NEK6Q9HC98 313 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 MLXIPLQ9NP71 852 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 GKN1Q9NS71 199 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 C1RLQ9NZP8 487 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 B3GAT1Q9P2W7 334 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 FOXJ3Q9UPW0 622 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 TNNQ9UQP3 1299 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 WDR83OSQ9Y284 106 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 LOXL2Q9Y4K0 774 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 YIPF1Q9Y548 306 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 RGPD3A6NKT7 1758 aaPredicted RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 RGPD4Q7Z3J3 1758 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 CCDC18Q5T9S5 1454 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 CCDC141Q6ZP82 1450 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 IL16Q14005 1332 aa2.89□□□□□ -1.95
KPNB1-208ENST00000580019 ATXN2Q99700 1313 aaKnown RBP2.89□□□□□ -1.95
KPNB1-208ENST00000580019 RRBP1Q9P2E9 1410 aaKnown RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 A0A1B0GTQ1 180 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 GOLGA6L9A6NEM1 432 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 ZNF879B4DU55 563 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 CHUKO15111 745 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 SLC22A2O15244 555 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 ALOX15BO15296 676 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 ADAM12O43184 909 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 NMT2O60551 498 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 LDB3O75112 727 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 BCAS1O75363 584 aaPredicted RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 TRIM3O75382 744 aaPredicted RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 STBD1O95210 358 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 YEATS4O95619 227 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 NPPAP01160 153 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 RAF1P04049 648 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 CAPN1P07384 714 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 HAPLN1P10915 354 aaPredicted RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 DBTP11182 482 aaKnown RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 GP9P14770 177 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 B4GALT1P15291 398 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms