RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 C6orf163Q5TEZ5 329 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 PRAMEF9Q5VWM5 478 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 SLC22A10Q63ZE4 541 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 ADNP2Q6IQ32 1131 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 MEX3BQ6ZN04 569 aaKnown RBP12.71□□□□□ -0.37
GGA3-208ENST00000579743 ZNF793Q6ZN11 406 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 TAOK1Q7L7X3 1001 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 UBE3DQ7Z6J8 389 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 ZCCHC7Q8N3Z6 543 aaKnown RBP12.71□□□□□ -0.37
GGA3-208ENST00000579743 FAM109AQ8N4B1 249 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 OR52N2Q8NGI0 321 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 HUS1BQ8NHY5 278 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 NUBPLQ8TB37 319 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 ATP6V1E2Q96A05 226 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 NXNL1Q96CM4 212 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 SENP5Q96HI0 755 aaPredicted RBP12.71□□□□□ -0.37
GGA3-208ENST00000579743 ATOH8Q96SQ7 321 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 TTTY12Q9BZ98 90 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 TRIM8Q9BZR9 551 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 OR51B5Q9H339 312 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 IL1RL2Q9HB29 575 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 PLSCR2Q9NRY7 297 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 IKBKGQ9Y6K9 419 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 NCOA6Q14686 2063 aaPredicted RBP12.7□□□□□ -0.38
GGA3-208ENST00000579743 CAPN14A8MX76 684 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 NPIPA2E9PIF3 369 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 NPIPA3F8WFD2 350 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 SAP18O00422 153 aaKnown RBP12.7□□□□□ -0.38
GGA3-208ENST00000579743 ADAM10O14672 748 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 ZNHIT1O43257 154 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 FAM155BO75949 473 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 HOXD4P09016 255 aaPredicted RBP12.7□□□□□ -0.38
GGA3-208ENST00000579743 ALOX15P16050 662 aaPredicted RBP12.7□□□□□ -0.38
GGA3-208ENST00000579743 EPORP19235 508 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 SERPINB3P29508 390 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 MAN2A2P49641 1150 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 SERPINB8P50452 374 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 KCNJ2P63252 427 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 TNFRSF17Q02223 184 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 ID2Q02363 134 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 ASPHQ12797 758 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 SETDB1Q15047 1291 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 PIGGQ5H8A4 983 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 WLSQ5T9L3 541 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 MROH9Q5TGP6 573 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 C8orf74Q6P047 294 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 C16orf47Q6ZP98 133 aaPredicted RBP12.7□□□□□ -0.38
GGA3-208ENST00000579743 FGD2Q7Z6J4 655 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 CHERPQ8IWX8 916 aaKnown RBP12.7□□□□□ -0.38
GGA3-208ENST00000579743 ST13P4Q8IZP2 240 aaPredicted RBP12.7□□□□□ -0.38
GGA3-208ENST00000579743 TAGAPQ8N103 731 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 OR10Q1Q8NGQ4 319 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 LILRB4Q8NHJ6 448 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 KCTD4Q8WVF5 259 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 ANKRD9Q96BM1 317 aaPredicted RBP12.7□□□□□ -0.38
GGA3-208ENST00000579743 SARAFQ96BY9 339 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 SCYL1Q96KG9 808 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 SMC6Q96SB8 1091 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 MTERF1Q99551 399 aaKnown RBP12.7□□□□□ -0.38
GGA3-208ENST00000579743 ZDHHC11Q9H8X9 412 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 IGSF5Q9NSI5 407 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 DEPPQ9NTK1 212 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 PSD3Q9NYI0 1048 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 CNIH4Q9P003 139 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 B4GALT7Q9UBV7 327 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 MTRF1LQ9UGC7 380 aaKnown RBP12.7□□□□□ -0.38
GGA3-208ENST00000579743 ACAD8Q9UKU7 415 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 TMCO1Q9UM00 188 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 BOKQ9UMX3 212 aaPredicted RBP12.7□□□□□ -0.38
GGA3-208ENST00000579743 PKDREJQ9NTG1 2253 aa12.7□□□□□ -0.38
GGA3-208ENST00000579743 A0A096LPK6 155 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 TMEM200CA6NKL6 621 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 OR6C76A6NM76 312 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 H0YIV9 168 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 FGF17O60258 216 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 SUSD5O60279 629 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 KLHL2O95198 593 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 ETHE1O95571 254 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 C2P06681 752 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 ACVR2AP27037 513 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 KIR3DL1P43629 444 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 IGLV3-21P80748 117 aaPredicted RBP12.69□□□□□ -0.38
GGA3-208ENST00000579743 FOLH1Q04609 750 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 PMPCAQ10713 525 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 DLG1Q12959 904 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 CUL3Q13618 768 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 GTF2H2Q13888 395 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 CPSF6Q16630 551 aaKnown RBP eCLIP12.69□□□□□ -0.38
GGA3-208ENST00000579743 GXYLT1Q4G148 440 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 C10orf62Q5T681 223 aaPredicted RBP12.69□□□□□ -0.38
GGA3-208ENST00000579743 HLA-DQA1Q5Y7H0 255 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 TTC19Q6DKK2 380 aaPredicted RBP12.69□□□□□ -0.38
GGA3-208ENST00000579743 GTF2H2CQ6P1K8 395 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 SYT10Q6XYQ8 523 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 RNF111Q6ZNA4 994 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 NUDT13Q86X67 352 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 OR4N5Q8IXE1 308 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 CLYBLQ8N0X4 340 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 MYRIPQ8NFW9 859 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 ZNF721Q8TF20 911 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms