RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 OR6B1O95007 311 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 CLDN14O95500 239 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 INHBAP08476 426 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 RBP1P09455 135 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 TNFRSF8P28908 595 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 PTGS2P35354 604 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 RFC3P40938 356 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 BUD31P41223 144 aaPredicted RBP10.7□□□□□ -0.7
SSH2-208ENST00000579040 MAGEA12P43365 314 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 SERPINB9P50453 376 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 GPR85P60893 370 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 ID2Q02363 134 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 CUL3Q13618 768 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 GTF2H2Q13888 395 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 MPEG1Q2M385 716 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 CMPK2Q5EBM0 449 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 TECRLQ5HYJ1 363 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 C10orf62Q5T681 223 aaPredicted RBP10.7□□□□□ -0.7
SSH2-208ENST00000579040 GTF2H2CQ6P1K8 395 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 ARHGAP11AQ6P4F7 1023 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 PAOXQ6QHF9 649 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 IL20RBQ6UXL0 311 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 C16orf47Q6ZP98 133 aaPredicted RBP10.7□□□□□ -0.7
SSH2-208ENST00000579040 GK5Q6ZS86 529 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 GOLGA7Q7Z5G4 137 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 FGD2Q7Z6J4 655 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 MCEMP1Q8IX19 187 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 MMGT1Q8N4V1 131 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 MNS1Q8NEH6 495 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 OR2M7Q8NG81 312 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 NUBPLQ8TB37 319 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 ZNF721Q8TF20 911 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 SLC44A1Q8WWI5 657 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 ISL2Q96A47 359 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 RBM18Q96H35 190 aaKnown RBP10.7□□□□□ -0.7
SSH2-208ENST00000579040 SGCZQ96LD1 299 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 C16orf45Q96MC5 204 aaPredicted RBP10.7□□□□□ -0.7
SSH2-208ENST00000579040 PHF12Q96QT6 1004 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 FAM173AQ9BQD7 235 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 DDX31Q9H8H2 851 aaKnown RBP10.7□□□□□ -0.7
SSH2-208ENST00000579040 IPPKQ9H8X2 491 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 LIN28AQ9H9Z2 209 aaKnown RBP10.7□□□□□ -0.7
SSH2-208ENST00000579040 DEPPQ9NTK1 212 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.7□□□□□ -0.7
SSH2-208ENST00000579040 CPSF2Q9P2I0 782 aaKnown RBP10.7□□□□□ -0.7
SSH2-208ENST00000579040 INTS1Q8N201 2190 aaKnown RBP10.7□□□□□ -0.7
SSH2-208ENST00000579040 EXPH5Q8NEV8 1989 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 FREM3P0C091 2139 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 HCFC1P51610 2035 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 A0A0A6YYD5 115 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 A0A1B0GTH9 108 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 LRRC14BA6NHZ5 514 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 STX16-NPEPL1H3BU86 382 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 STX16O14662 325 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 ADAM10O14672 748 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 PROM1O43490 865 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 CDC40O60508 579 aaKnown RBP eCLIP10.69□□□□□ -0.7
SSH2-208ENST00000579040 SEMA3DO95025 777 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 ETHE1O95571 254 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 IGKV3-11P04433 115 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 TPOP07202 933 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 COL6A2P12110 1019 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 PRF1P14222 555 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 COX6B1P14854 86 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 ALOX15P16050 662 aaPredicted RBP10.69□□□□□ -0.7
SSH2-208ENST00000579040 CNTFP26441 200 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 HNRNPH2P55795 449 aaKnown RBP10.69□□□□□ -0.7
SSH2-208ENST00000579040 RPS13P62277 151 aaKnown RBP10.69□□□□□ -0.7
SSH2-208ENST00000579040 PLGLB1Q02325 96 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 FOLH1Q04609 750 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 TBL3Q12788 808 aaKnown RBP10.69□□□□□ -0.7
SSH2-208ENST00000579040 CPSF6Q16630 551 aaKnown RBP eCLIP10.69□□□□□ -0.7
SSH2-208ENST00000579040 TSNAXIP1Q2TAA8 658 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 NDUFAF5Q5TEU4 345 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 MRM1Q6IN84 353 aaKnown RBP10.69□□□□□ -0.7
SSH2-208ENST00000579040 GDF7Q7Z4P5 450 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 SLC22A16Q86VW1 577 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 ST13P4Q8IZP2 240 aaPredicted RBP10.69□□□□□ -0.7
SSH2-208ENST00000579040 RNF175Q8N4F7 328 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 SLC15A4Q8N697 577 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 ZNF321PQ8N8H1 164 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 WDR20Q8TBZ3 569 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 SLC22A8Q8TCC7 542 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 MTFMTQ96DP5 389 aaKnown RBP10.69□□□□□ -0.7
SSH2-208ENST00000579040 SENP5Q96HI0 755 aaPredicted RBP10.69□□□□□ -0.7
SSH2-208ENST00000579040 FBXL20Q96IG2 436 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 FMO2Q99518 471 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 SORBS1Q9BX66 1292 aaKnown RBP10.69□□□□□ -0.7
SSH2-208ENST00000579040 ZNF717Q9BY31 904 aaPredicted RBP10.69□□□□□ -0.7
SSH2-208ENST00000579040 VPS11Q9H270 941 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 CDC42EP4Q9H3Q1 356 aaKnown RBP10.69□□□□□ -0.7
SSH2-208ENST00000579040 ZDHHC11Q9H8X9 412 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 WDR41Q9HAD4 459 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 SACM1LQ9NTJ5 587 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 ATG4BQ9Y4P1 393 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 IKBKGQ9Y6K9 419 aa10.69□□□□□ -0.7
SSH2-208ENST00000579040 KRT38O76015 456 aa10.68□□□□□ -0.7
SSH2-208ENST00000579040 SIX3O95343 332 aaPredicted RBP10.68□□□□□ -0.7
SSH2-208ENST00000579040 CLDN9O95484 217 aa10.68□□□□□ -0.7
SSH2-208ENST00000579040 ACSL3O95573 720 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms