RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 UNC13CQ8NB66 2214 aa7.57□□□□□ -1.2
COPS3-215ENST00000578317 CEP250Q9BV73 2442 aa7.57□□□□□ -1.2
COPS3-215ENST00000578317 CCDC187A0A096LP49 1063 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 SPAARA0A1B0GVQ0 90 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 GNG14A0A1W2PPG7 69 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 DYTNA2CJ06 578 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 ANKRD34BA5PLL1 514 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 EFCAB7A8K855 629 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 PROM1O43490 865 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 RRP9O43818 475 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 B3GALT2O43825 422 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 TMPRSS11DO60235 418 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 TBX19O60806 448 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 CSO75390 466 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 SLC22A3O75751 556 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 UBOX5O94941 541 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 KCNK5O95279 499 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 IL10P22301 178 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 TACR1P25103 407 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 RPL3P39023 403 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 PLA2G5P39877 138 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 AVPR1BP47901 424 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 MAPK12P53778 367 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 KLF10Q13118 480 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 KRT72Q14CN4 511 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 HEPACAMQ14CZ8 416 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 DEFB134Q4QY38 66 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 HES3Q5TGS1 186 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 FAM71E1Q6IPT2 247 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 RAB11FIP2Q7L804 512 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 CAMKMTQ7Z624 323 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 GPR180Q86V85 440 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 PDSS2Q86YH6 399 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 FUNDC1Q8IVP5 155 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 LIX1Q8N485 282 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 NATD1Q8N6N6 113 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 AMER3Q8N944 861 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 TESCQ96BS2 214 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 COQ8BQ96D53 544 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 EGLN2Q96KS0 407 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 LRFN5Q96NI6 719 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 CATSPER2Q96P56 530 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 C1orf50Q9BV19 199 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 SORBS1Q9BX66 1292 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 ASPSCR1Q9BZE9 553 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 DPY30Q9C005 99 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.56□□□□□ -1.2
COPS3-215ENST00000578317 CUTCQ9NTM9 273 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 LYARQ9NX58 379 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 EHD3Q9NZN3 535 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 BAIAP2L1Q9UHR4 511 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 DAPP1Q9UN19 280 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 MRPS2Q9Y399 296 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 NAALAD2Q9Y3Q0 740 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 PCM1Q15154 2024 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 BLACEA4D250 179 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 CCT8L1PA6NM43 557 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 GABRR3A8MPY1 467 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 CYR61O00622 381 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 DSCR3O14972 297 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 MED26O95402 600 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 STATHP02808 62 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 IL6P05231 212 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 CCL4P13236 92 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 DDX5P17844 614 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 DDCP20711 480 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 PRDX6P30041 224 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 NOVA1P51513 510 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 CLNS1AP54105 237 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 LIM2P55344 173 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 TAS2R50P59544 299 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 UFM1P61960 85 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 RAC1P63000 192 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 FOXM1Q08050 763 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 PDE7AQ13946 482 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 RUNX2Q13950 521 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 PTGR1Q14914 329 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 NKG7Q16617 165 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 DPY19L1Q2PZI1 675 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 CCDC157Q569K6 752 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 PWWP2BQ6NUJ5 590 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 PAOXQ6QHF9 649 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 CEACAM20Q6UY09 585 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 TMPRSS7Q7RTY8 843 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 DGLUCYQ7Z3D6 616 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 R3HCC1LQ7Z5L2 792 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 GALNT15Q8N3T1 639 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 TMEM132CQ8N3T6 1108 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 C7orf57Q8NEG2 295 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 OR8J2Q8NGG1 315 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 WDR36Q8NI36 951 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 RP9Q8TA86 221 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 NINJ1Q92982 152 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 CMTM5Q96DZ9 223 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 TEX37Q96LM6 180 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 TSSK3Q96PN8 268 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 TAAR9Q96RI9 348 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 PRPF18Q99633 342 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 DPH2Q9BQC3 489 aaPredicted RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 DDA1Q9BW61 102 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms