RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 CHCHD2Q9Y6H1 151 aaPredicted RBP12.88□□□□□ -0.35
PPP4R1-206ENST00000577779 CTAGE9A4FU28 777 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 B3GALT2O43825 422 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 CTNSO60931 367 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 TMCC2O75069 709 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 TRIM3O75382 744 aaPredicted RBP12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 RCBTB2O95199 551 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 TPM3P06753 285 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 C8GP07360 202 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 F7P08709 466 aaPredicted RBP12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 TPM1P09493 284 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 NPY2RP49146 381 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 STXBP1P61764 594 aaKnown RBP12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 REEP5Q00765 189 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 KLF1Q13351 362 aaPredicted RBP12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 RBBP5Q15291 538 aaKnown RBP12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 TOMM20Q15388 145 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 NEPROQ6NW34 567 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 ZNF549Q6P9A3 640 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 LYPD8Q6UX82 237 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 BTLAQ7Z6A9 289 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 DND1Q8IYX4 353 aaKnown RBP12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 SLC15A4Q8N697 577 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 GPATCH11Q8N954 259 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 SLC5A11Q8WWX8 675 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 ATG4AQ8WYN0 398 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 NEIL2Q969S2 332 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 GAL3ST3Q96A11 431 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 TSNARE1Q96NA8 513 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 FAM111AQ96PZ2 611 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 OR4K3Q96R72 315 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 KIFC1Q9BW19 673 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 ACBD3Q9H3P7 528 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 AMFRQ9UKV5 643 aa12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 CNOT11Q9UKZ1 510 aaKnown RBP12.87□□□□□ -0.35
PPP4R1-206ENST00000577779 TCRBV7S2A1N4TA0A589 114 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 EIF3FO00303 357 aaPredicted RBP12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 HIST1H2AGP0C0S8 130 aaPredicted RBP12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 ETS1P14921 441 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 HIST1H2ADP20671 130 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 MGAT1P26572 445 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 SERPINB3P29508 390 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 SOX18P35713 384 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 SP140Q13342 867 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 ZNF470Q6ECI4 717 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 PRUNE1Q86TP1 453 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 NUBPLQ8TB37 319 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 ZNF721Q8TF20 911 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 DIO2Q92813 273 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 HIST1H2AHQ96KK5 128 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 MARK4Q96L34 752 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 CSF3RQ99062 836 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 HIST1H2AJQ99878 128 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 TUBA1CQ9BQE3 449 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 AIF1LQ9BQI0 150 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 H2AFJQ9BTM1 129 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 UBQLN3Q9H347 655 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 FBXO6Q9NRD1 293 aaPredicted RBP12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 SYBUQ9NX95 663 aa12.86□□□□□ -0.35
PPP4R1-206ENST00000577779 A0A088AWK7 358 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 PABPN1LA6NDY0 278 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 AP3B1O00203 1094 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 CYR61O00622 381 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 ERI3O43414 337 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 MFAP3LO75121 409 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 SMNDC1O75940 238 aaKnown RBP eCLIP12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 ETHE1O95571 254 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 MBD3O95983 291 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 FBXO45P0C2W1 286 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 ZNF10P21506 573 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 LOXP28300 417 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 CD79BP40259 229 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 MSH2P43246 934 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 EEF1A1P68104 462 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 DHX9Q08211 1270 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 GAB1Q13480 694 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 EFTUD2Q15029 972 aaKnown RBP eCLIP12.85□□□□□ -0.352e-9■■■□□ 18.9
PPP4R1-206ENST00000577779 ETFDHQ16134 617 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 EIPR1Q53HC9 387 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 TBCELQ5QJ74 424 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 EEF1A1P5Q5VTE0 462 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 LRRC8EQ6NSJ5 796 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 PLXDC2Q6UX71 529 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 CAND1Q86VP6 1230 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 C9orf40Q8IXQ3 194 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 OR56A3Q8NH54 315 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 EEF1AKMT1Q8WVE0 214 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 WNT2BQ93097 391 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 UCN3Q969E3 161 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 ANKRD9Q96BM1 317 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 ZC3HAV1LQ96H79 300 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 GNRHR2Q96P88 292 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 ARL15Q9NXU5 204 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 C15orf41Q9Y2V0 281 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 PCDHA13Q9Y5I0 950 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 IKBKGQ9Y6K9 419 aa12.85□□□□□ -0.35
PPP4R1-206ENST00000577779 ANKRD33BA6NCL7 494 aa12.84□□□□□ -0.35
PPP4R1-206ENST00000577779 BTNL10A8MVZ5 291 aa12.84□□□□□ -0.35
PPP4R1-206ENST00000577779 H0Y3Z8 333 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms