RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 KCNJ2P63252 427 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 CDKL1Q00532 357 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 CRYZQ08257 329 aaKnown RBP9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 STX4Q12846 297 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 DUSP8Q13202 625 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 RCN2Q14257 317 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 CRYMQ14894 314 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 PCBP2Q15366 365 aaKnown RBP eCLIP9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 NSUN5P2Q63ZY6 315 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 TRIM40Q6P9F5 258 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 C9orf40Q8IXQ3 194 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 CIARTQ8N365 385 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 NUBPLQ8TB37 319 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 ANKRD7Q92527 254 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 ANKRD9Q96BM1 317 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 SPACA9Q96E40 222 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 SENP5Q96HI0 755 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 COX4I2Q96KJ9 171 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 PITHD1Q9GZP4 211 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 PRDM14Q9GZV8 571 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 EPB41L4BQ9H329 900 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 LYRM4Q9HD34 91 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 COPS7AQ9UBW8 275 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 ZNF490Q9ULM2 529 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 CHCHD2Q9Y6H1 151 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 TLN2Q9Y4G6 2542 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 ANKDD1BA6NHY2 528 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 CD8B2A6NJW9 211 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 CDC7O00311 574 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 ARHGEF9O43307 516 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 TRIM3O75382 744 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 TTC4O95801 387 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 PGAM1P18669 254 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 CTSSP25774 331 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 HPDP32754 393 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 GDF5P43026 501 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 SLC6A12P48065 614 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 HNMTP50135 292 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 IGLV3-21P80748 117 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 SLBPQ14493 270 aaKnown RBP eCLIP9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 TEDDM1Q5T9Z0 273 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 PRAMEF20Q5VT98 475 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 VASNQ6EMK4 673 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 UBE3DQ7Z6J8 389 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 DND1Q8IYX4 353 aaKnown RBP9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 RASGEF1CQ8N431 466 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 LIX1Q8N485 282 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 C7orf57Q8NEG2 295 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 OR10G3Q8NGC4 313 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 GABPB2Q8TAK5 448 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 SLC22A8Q8TCC7 542 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 CCT6BQ92526 530 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 RUNDC3BQ96NL0 473 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 DACH2Q96NX9 599 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 WDR83Q9BRX9 315 aaKnown RBP9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 PLAC1Q9HBJ0 212 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 CNOT11Q9UKZ1 510 aaKnown RBP9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 CORO1CQ9ULV4 474 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 IKBKGQ9Y6K9 419 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 MXRA5Q9NR99 2828 aa9.15□□□□□ -0.94
CALCOCO2-227ENST00000575560 NCKAP5O14513 1909 aa9.15□□□□□ -0.95
CALCOCO2-227ENST00000575560 C15orf38-AP3S2A0A0A6YYH1 394 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 ANKRD33BA6NCL7 494 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 MBD3L4A6NDZ8 208 aaPredicted RBP9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 MBD3L3A6NE82 208 aaPredicted RBP9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 MBD3L5A6NJ08 208 aaPredicted RBP9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 HRKO00198 91 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 PRAMEF4O60810 478 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 WDR47O94967 919 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 IL18BPO95998 194 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 HPNP05981 417 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 FBXO45P0C2W1 286 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 CXCR5P32302 372 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 OPRM1P35372 400 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 KCNC1P48547 511 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 AGFG1P52594 562 aaKnown RBP9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 ID2Q02363 134 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 SF3B4Q15427 424 aaKnown RBP eCLIP9.14□□□□□ -0.952e-27■■■■■ 47.2
CALCOCO2-227ENST00000575560 C18orf21Q32NC0 220 aaPredicted RBP9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 NHSL2Q5HYW2 709 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 SPANXN3Q5MJ09 141 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 LCE2DQ5TA82 110 aaPredicted RBP9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 PRAMEF9Q5VWM5 478 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 ADNP2Q6IQ32 1131 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 FAM45BPQ6NSW5 357 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 PRSS57Q6UWY2 283 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 ZNF793Q6ZN11 406 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 DGAT2L6Q6ZPD8 337 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 CXXC5Q7LFL8 322 aaKnown RBP9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 PM20D2Q8IYS1 436 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 LRRC75A-AS1Q8N1F1 130 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 KRT78Q8N1N4 520 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 MBD3L2Q8NHZ7 208 aaPredicted RBP9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 FAM45AQ8TCE6 357 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 SMPDL3BQ92485 455 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 RHBDF1Q96CC6 855 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 HSPBAP1Q96EW2 488 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 KCNC2Q96PR1 638 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 F2RL3Q96RI0 385 aa9.14□□□□□ -0.95
CALCOCO2-227ENST00000575560 PIP5K1AQ99755 562 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms