RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	RPS17	P08708	135 aa	Known RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	NME2	P22392	152 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	NR0B1	P51843	470 aa	Known RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	RAP1GDS1	P52306	607 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	IGLV3-21	P80748	117 aa	Predicted RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	STX4	Q12846	297 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	CUL3	Q13618	768 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	TSNAXIP1	Q2TAA8	658 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	TNFAIP8L3	Q5GJ75	292 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	TRABD2A	Q86V40	505 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	GPR180	Q86V85	440 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	FJX1	Q86VR8	437 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	SIAH3	Q8IW03	269 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	CHERP	Q8IWX8	916 aa	Known RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	TMEM132C	Q8N3T6	1108 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	CPSF7	Q8N684	471 aa	Known RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	GOLGA6L1	Q8N7Z2	621 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	OR4F6	Q8NGB9	312 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	ZNF721	Q8TF20	911 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	RELT	Q969Z4	430 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	ATP6V1E2	Q96A05	226 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	MRPL57	Q9BQC6	102 aa	Known RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	MRPL46	Q9H2W6	279 aa	Known RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	CENPH	Q9H3R5	247 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	RPF2	Q9H7B2	306 aa	Known RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	DDX31	Q9H8H2	851 aa	Known RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	TMBIM4	Q9HC24	238 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	PRM3	Q9NNZ6	103 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	FARSB	Q9NSD9	589 aa	Known RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	ZNF446	Q9NWS9	450 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	PSD3	Q9NYI0	1048 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	ACTL7B	Q9Y614	415 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	CLCA3P	Q9Y6N3	262 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	UTP20	O75691	2785 aa	Known RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507		A0A1W2PPM1	405 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	NPIPA5	E9PKD4	350 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	GOLGA8R	I6L899	631 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	WWP2	O00308	870 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	PGRMC2	O15173	223 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	DLX3	O60479	287 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	ZG16	O60844	167 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	SASH3	O75995	380 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	OR2J2	O76002	312 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	ZFAND5	O76080	213 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	GSTA1	P08263	222 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	PYGB	P11216	843 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	KRT4	P19013	534 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	TNNI3	P19429	210 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	CCNG1	P51959	295 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	FOLH1	Q04609	750 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	SERTAD2	Q14140	314 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	RCN2	Q14257	317 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	LETMD1	Q6P1Q0	360 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	SH2D5	Q6ZV89	423 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	SULF2	Q8IWU5	870 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	TMEM178A	Q8NBL3	297 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	MORN4	Q8NDC4	146 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	SLC2A12	Q8TD20	617 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	ZNF483	Q8TF39	744 aa	Predicted RBP	13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	SH3GL2	Q99962	352 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	OR8D2	Q9GZM6	311 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	DEPP	Q9NTK1	212 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	MYOT	Q9UBF9	498 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	DCDC2	Q9UHG0	476 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	NPIPA1	Q9UND3	350 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	ESPL1	Q14674	2120 aa		13.16	□□□□□ -0.3
EDC4-210	ENST00000575507	ARHGAP10	A1A4S6	786 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	C17orf105	B2RV13	164 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	FCHO1	O14526	889 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	ASNA1	O43681	348 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	SMIM24	O75264	130 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	OR6B1	O95007	311 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	FAM58BP	P0C7Q3	252 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	RFC3	P40938	356 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	CCT5	P48643	541 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	HK2	P52789	917 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	ARFIP1	P53367	373 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	GPR85	P60893	370 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	RNF4	P78317	190 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	HSF1	Q00613	529 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	TNFRSF17	Q02223	184 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	ALDH6A1	Q02252	535 aa	Known RBP	13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	SLC18A2	Q05940	514 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	UNC50	Q53HI1	259 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	SGO1	Q5FBB7	561 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	AGBL2	Q5U5Z8	902 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	FRG2	Q64ET8	278 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	HSDL2	Q6YN16	418 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	FGD2	Q7Z6J4	655 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	MILR1	Q7Z6M3	343 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	SRRM1	Q8IYB3	904 aa	Known RBP	13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	HORMAD2	Q8N7B1	307 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	DAZL	Q92904	295 aa	Known RBP	13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	REPS1	Q96D71	796 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	SENP5	Q96HI0	755 aa	Predicted RBP	13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	GPR137	Q96N19	417 aa		13.15	□□□□□ -0.3
EDC4-210	ENST00000575507	FRG2B	Q96QU4	278 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms