RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 CLHC1Q8NHS4 586 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 MTERF3Q96E29 417 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 BRINP2Q9C0B6 783 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 TRIM33Q9UPN9 1127 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 A0A087WV48 116 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 TCRBV16S1A1N1A0A5B0 115 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 E9PBE3 544 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 FGF17O60258 216 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 KLHL41O60662 606 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 SHOX2O60902 331 aaPredicted RBP16.04■□□□□ 0.16
NUP88-210ENST00000574867 LDB3O75112 727 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 PRPS1L1P21108 318 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 C21orf58P58505 322 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 IGLV3-21P80748 117 aaPredicted RBP16.04■□□□□ 0.16
NUP88-210ENST00000574867 FOLH1Q04609 750 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 ACTN3Q08043 901 aaPredicted RBP16.04■□□□□ 0.16
NUP88-210ENST00000574867 SRSF6Q13247 344 aaKnown RBP16.04■□□□□ 0.16
NUP88-210ENST00000574867 CPLX4Q7Z7G2 160 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 SAMD14Q8IZD0 417 aaPredicted RBP16.04■□□□□ 0.16
NUP88-210ENST00000574867 ADAMTS17Q8TE56 1095 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 TSLPQ969D9 159 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 KLHL29Q96CT2 875 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 RILPQ96NA2 401 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 REEP4Q9H6H4 257 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 CES1P1Q9UKY3 287 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 HS3ST3B1Q9Y662 390 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 SCN2AQ99250 2005 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 A0A1W2PQ72 361 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 OR2W5A6NFC9 320 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 PGRMC2O15173 223 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 TBX19O60806 448 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 GPR75O95800 540 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 FURINP09958 794 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 DRD4P21917 467 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 PIK3R1P27986 724 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 OTX2P32243 289 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 CLDN8P56748 225 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 TLE3Q04726 772 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 PDE7AQ13946 482 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 TMEM151BQ8IW70 566 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 MMP21Q8N119 569 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 OR4K14Q8NGD5 310 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 ANKRD9Q96BM1 317 aaPredicted RBP16.03■□□□□ 0.16
NUP88-210ENST00000574867 PELOQ9BRX2 385 aaKnown RBP16.03■□□□□ 0.16
NUP88-210ENST00000574867 NECTIN3Q9NQS3 549 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 GIMAP4Q9NUV9 329 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 TAS2R7Q9NYW3 318 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 UTS2RQ9UKP6 389 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 CLDN16Q9Y5I7 305 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 CHD8Q9HCK8 2581 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 LOC102723996A0A087X1L8 192 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 SCAMP2O15127 329 aaKnown RBP16.03■□□□□ 0.16
NUP88-210ENST00000574867 PLIN5Q00G26 463 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 RPS6KA2Q15349 733 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 METTL21CQ5VZV1 264 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 TMEM198Q66K66 360 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 FAAH2Q6GMR7 532 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 CCDC81Q6ZN84 652 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 RIPOR1Q6ZS17 1223 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 SPATA21Q7Z572 469 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 PPP1R32Q7Z5V6 425 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 ANKRD37Q7Z713 158 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 MRGPREQ86SM8 312 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 TICAM1Q8IUC6 712 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 PPCDCQ96CD2 204 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 FAM107BQ9H098 131 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 EPN3Q9H201 632 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 EXO1Q9UQ84 846 aaKnown RBP16.03■□□□□ 0.16
NUP88-210ENST00000574867 GPR45Q9Y5Y3 372 aa16.03■□□□□ 0.16
NUP88-210ENST00000574867 FRYQ5TBA9 3013 aa16.02■□□□□ 0.16
NUP88-210ENST00000574867 TGFBR3LH3BV60 316 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 TAF4O00268 1085 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 EFSO43281 561 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 AKAP10O43572 662 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 LRATO95237 230 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 WT1P19544 449 aaPredicted RBP16.02■□□□□ 0.15
NUP88-210ENST00000574867 MRPL19P49406 292 aaKnown RBP16.02■□□□□ 0.15
NUP88-210ENST00000574867 CLNS1AP54105 237 aaKnown RBP16.02■□□□□ 0.15
NUP88-210ENST00000574867 STX1BP61266 288 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 PDCD4Q53EL6 469 aaKnown RBP16.02■□□□□ 0.15
NUP88-210ENST00000574867 LANCL3Q6ZV70 420 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 C10orf82Q8WW14 230 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 UCN3Q969E3 161 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 GFM2Q969S9 779 aaKnown RBP16.02■□□□□ 0.15
NUP88-210ENST00000574867 PRPF18Q99633 342 aaKnown RBP16.02■□□□□ 0.15
NUP88-210ENST00000574867 ALOXE3Q9BYJ1 711 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 DPY30Q9C005 99 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 SDR39U1Q9NRG7 319 aaPredicted RBP16.02■□□□□ 0.15
NUP88-210ENST00000574867 C5AR2Q9P296 337 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 ATP6V1HQ9UI12 483 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 ENTPD4Q9Y227 616 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 ZNF780BQ9Y6R6 833 aa16.02■□□□□ 0.15
NUP88-210ENST00000574867 SOCS6O14544 535 aa16.01■□□□□ 0.15
NUP88-210ENST00000574867 ANKRD28O15084 1053 aa16.01■□□□□ 0.15
NUP88-210ENST00000574867 ERAL1O75616 437 aaKnown RBP16.01■□□□□ 0.15
NUP88-210ENST00000574867 OR4D2P58180 307 aa16.01■□□□□ 0.15
NUP88-210ENST00000574867 CDC20Q12834 499 aa16.01■□□□□ 0.15
NUP88-210ENST00000574867 DPY19L1Q2PZI1 675 aa16.01■□□□□ 0.15
NUP88-210ENST00000574867 CPEB2Q7Z5Q1 589 aaKnown RBP16.01■□□□□ 0.15
NUP88-210ENST00000574867 RIMKLAQ8IXN7 391 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms