RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 HMGA2P52926 109 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 MVDP53602 400 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 NFATC2Q13469 925 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 GPR176Q14439 515 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 INSL4Q14641 139 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 PLK5Q496M5 336 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 KLHL12Q53G59 568 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 GARNL3Q5VVW2 1013 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 ZNF770Q6IQ21 691 aaPredicted RBP13.73□□□□□ -0.21
SMG6-215ENST00000574501 ADNP2Q6IQ32 1131 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 ARSKQ6UWY0 536 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 UNC5DQ6UXZ4 953 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 B3GLCTQ6Y288 498 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 UBE2R2Q712K3 238 aaPredicted RBP13.73□□□□□ -0.21
SMG6-215ENST00000574501 HUS1BQ8NHY5 278 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 UCN3Q969E3 161 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 ATF6BQ99941 703 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 HTATIP2Q9BUP3 242 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 CCSER2Q9H7U1 834 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 ERVMER34-1Q9H9K5 563 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 ZC4H2Q9NQZ6 224 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 VPS29Q9UBQ0 182 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 CORO2BQ9UQ03 480 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 FFAR1O14842 300 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 KDELR3O43731 214 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 MPC2O95563 127 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 OSMP13725 252 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 HMGCLP35914 325 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 ZNF81P51508 661 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 HBA1P69905 142 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 CSTF1Q05048 431 aaKnown RBP13.73□□□□□ -0.21
SMG6-215ENST00000574501 ACSM2AQ08AH3 577 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 KCNC3Q14003 757 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 HEPACAMQ14CZ8 416 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 SEC23BQ15437 767 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 GCNT6Q5T4J0 391 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 ACSM2BQ68CK6 577 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 TMEM81Q6P7N7 255 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 VPS37AQ8NEZ2 397 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 GPR156Q8NFN8 814 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 SORCS2Q96PQ0 1159 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 FBXO44Q9H4M3 255 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 RANBP3Q9H6Z4 567 aaPredicted RBP13.73□□□□□ -0.21
SMG6-215ENST00000574501 SLCO1C1Q9NYB5 712 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 HCN2Q9UL51 889 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 EXO1Q9UQ84 846 aaKnown RBP13.73□□□□□ -0.21
SMG6-215ENST00000574501 ENPP4Q9Y6X5 453 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 DSPPQ9NZW4 1301 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 PRR23AA6NEV1 266 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 PRRG1O14668 218 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 SLC30A4O14863 429 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 OR10H3O60404 316 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 CFDP00746 253 aaPredicted RBP13.72□□□□□ -0.21
SMG6-215ENST00000574501 XKP51811 444 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 MAP2K6P52564 334 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 LIM2P55344 173 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 SEMG2Q02383 582 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 TAF10Q12962 218 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 GGTA1PQ4G0N0 100 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 SPRYD7Q5W111 196 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 LIPIQ6XZB0 460 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 L3MBTL4Q8NA19 623 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 OR6K2Q8NGY2 324 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 SLC35A5Q9BS91 424 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 MED18Q9BUE0 208 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 FOLH1BQ9HBA9 442 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 CRLS1Q9UJA2 301 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 SF3B6Q9Y3B4 125 aaKnown RBP13.72□□□□□ -0.21
SMG6-215ENST00000574501 PCDHB7Q9Y5E2 793 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 A0A1B0GVC2 190 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 A6NIN4 97 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 RFXAPO00287 272 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 PRKYO43930 277 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 PRMT3O60678 531 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 ETHE1O95571 254 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 CD22P20273 847 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 PPIBP23284 216 aaKnown RBP13.72□□□□□ -0.21
SMG6-215ENST00000574501 ACRV1P26436 265 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 CD79BP40259 229 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 BDKRB1P46663 353 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 PSEN2P49810 448 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 SGSHP51688 502 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 BEX3Q00994 111 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 STK11Q15831 433 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 LGALSLQ3ZCW2 172 aaPredicted RBP13.72□□□□□ -0.21
SMG6-215ENST00000574501 ZNF385BQ569K4 471 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 METTL2BQ6P1Q9 378 aaKnown RBP13.72□□□□□ -0.21
SMG6-215ENST00000574501 TMEM107Q6UX40 140 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 ADGRD2Q7Z7M1 963 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 GPALPP1Q8IXQ4 340 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 ATAD1Q8NBU5 361 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 PPA2Q9H2U2 334 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 LINC00597Q9H2U6 94 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 IL26Q9NPH9 171 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 RDH8Q9NYR8 311 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 RNF181Q9P0P0 153 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 BTNL2Q9UIR0 455 aa13.72□□□□□ -0.21
SMG6-215ENST00000574501 SHISA3A0PJX4 238 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 SGK494L7N484 410 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 KPNA5O15131 536 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms