RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 CPA3P15088 417 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 GGT5P36269 586 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 DCTP40126 519 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 CYB561P49447 251 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 CLCN2P51788 898 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 HK2P52789 917 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 MTTPP55157 894 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 BST1Q10588 318 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 CHIT1Q13231 466 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 LAPTM5Q13571 262 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 DOC2AQ14183 400 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 ZRSR2Q15696 482 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 CFAP157Q5JU67 520 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 CDKL4Q5MAI5 379 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 ADNP2Q6IQ32 1131 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 SLC25A25Q6KCM7 469 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 MYLK4Q86YV6 388 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 KIRREL3Q8IZU9 778 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 LGI4Q8N135 537 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 TMEM156Q8N614 296 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 B3GNT7Q8NFL0 401 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 KLHL29Q96CT2 875 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 THOC1Q96FV9 657 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 SCMH1Q96GD3 660 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 SERINC2Q96SA4 455 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 NPLQ9BXD5 320 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 TMEM120AQ9BXJ8 343 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 CD244Q9BZW8 370 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 EHD1Q9H4M9 534 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 NT5DC2Q9H857 520 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 COPG2Q9UBF2 871 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 DCTN4Q9UJW0 460 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 ACOT9Q9Y305 439 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 ANGPTL3Q9Y5C1 460 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 PCDHGB6Q9Y5F9 930 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 SPACA6W5XKT8 324 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 ITPR2Q14571 2701 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 IGKV3D-11A0A0A0MRZ8 115 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 SYCE1LA8MT33 242 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 PRSS44E7EML9 344 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 NPIPA5E9PKD4 350 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 CCDC22O60826 627 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 KERAO60938 352 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 NEURL1O76050 574 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 HSPA4LO95757 839 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 SP1P08047 785 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 ESRRAP11474 423 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 GFAPP14136 432 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 ZNF24P17028 368 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 PPP2R1BP30154 601 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 ARL1P40616 181 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 SSR2P43308 183 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 KCNC1P48547 511 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 RAP1GDS1P52306 607 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 HNRNPFP52597 415 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 LIM2P55344 173 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 HSD17B7P56937 341 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 STX4Q12846 297 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 DDX39BQ13838 428 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 RUNX2Q13950 521 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 PCLAFQ15004 111 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 SCUBE1Q8IWY4 988 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 ZNF595Q8IYB9 648 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 ARHGAP24Q8N264 748 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 TMEM52Q8NDY8 209 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 SRFBP1Q8NEF9 429 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 KCTD4Q8WVF5 259 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 UBE2E3Q969T4 207 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 NCLNQ969V3 563 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 CCDC126Q96EE4 140 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 VMP1Q96GC9 406 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 UBXN10Q96LJ8 280 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 GPR137Q96N19 417 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 KCNC2Q96PR1 638 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 F2RL3Q96RI0 385 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 CSF3RQ99062 836 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 MECRQ9BV79 373 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 ROGDIQ9GZN7 287 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 MYLK2Q9H1R3 596 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 C12orf65Q9H3J6 166 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 ADAP2Q9NPF8 381 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 SAR1AQ9NR31 198 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.02□□□□□ -0.972e-6■■■□□ 16.1
NPLOC4-216ENST00000574344 PTBP2Q9UKA9 531 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 DAPP1Q9UN19 280 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 NPIPA1Q9UND3 350 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 ASB1Q9Y576 335 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 CLCA3PQ9Y6N3 262 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 CACNA1CQ13936 2221 aa9.02□□□□□ -0.97
NPLOC4-216ENST00000574344 NCOA6Q14686 2063 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-216ENST00000574344 MYOCOSA0A1B0GUC4 107 aa9.01□□□□□ -0.97
NPLOC4-216ENST00000574344 ARHGAP10A1A4S6 786 aa9.01□□□□□ -0.97
NPLOC4-216ENST00000574344 SYNDIG1LA6NDD5 238 aa9.01□□□□□ -0.97
NPLOC4-216ENST00000574344 K7EPI3 171 aa9.01□□□□□ -0.97
NPLOC4-216ENST00000574344 RTCAO00442 366 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-216ENST00000574344 TFECO14948 347 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-216ENST00000574344 NME2P1O60361 137 aa9.01□□□□□ -0.97
NPLOC4-216ENST00000574344 SLC19A2O60779 497 aa9.01□□□□□ -0.97
NPLOC4-216ENST00000574344 PRAMEF4O60810 478 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms