RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 THAP1Q9NVV9 213 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 C1orf109Q9NX04 203 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 VTI1BQ9UEU0 232 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 ZDHHC2Q9UIJ5 367 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 TMED5Q9Y3A6 229 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 NBEAQ8NFP9 2946 aa11.96□□□□□ -0.5
TRAPPC1-206ENST00000573989 PIEZO2Q9H5I5 2752 aa11.96□□□□□ -0.5
TRAPPC1-206ENST00000573989 A8MUA0 341 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 TMEM233B4DJY2 109 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 PIP5K1BO14986 540 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 ITM2AO43736 263 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 DPM1O60762 260 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 LYPLA1O75608 230 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 SASH3O75995 380 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 GPR75O95800 540 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 DRD2P14416 443 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 MAPK1P28482 360 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 SLC26A5P58743 744 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 PPP2R2AP63151 447 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 FOLH1Q04609 750 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 ZNF763Q0D2J5 394 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 BST1Q10588 318 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 RAPSNQ13702 412 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 ATP6AP1LQ52LC2 224 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 CRB2Q5IJ48 1285 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 C6orf163Q5TEZ5 329 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 PCSK4Q6UW60 755 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 ASB18Q6ZVZ8 466 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 SAMD14Q8IZD0 417 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 ST13P4Q8IZP2 240 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 B3GNT7Q8NFL0 401 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 OR4K14Q8NGD5 310 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 OR14A16Q8NHC5 309 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 TM4SF18Q96CE8 201 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 ART5Q96L15 291 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 WDR77Q9BQA1 342 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 MESP1Q9BRJ9 268 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 NUDT9Q9BW91 350 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 EPS8L2Q9H6S3 715 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 KCNK13Q9HB14 408 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 MMP25Q9NPA2 562 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 GIMAP4Q9NUV9 329 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 TEX10Q9NXF1 929 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 TP53TG5Q9Y2B4 290 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 PCDHA9Q9Y5H5 950 aa11.95□□□□□ -0.5
TRAPPC1-206ENST00000573989 TNRC6AQ8NDV7 1962 aaKnown RBP11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 ZFYVE26Q68DK2 2539 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 ATMQ13315 3056 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 GLOD5A6NK44 160 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 MASP2O00187 686 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 ATP8B1O43520 1251 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 FGF17O60258 216 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 OR10H2O60403 315 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 SKAP2O75563 359 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 ALOX15P16050 662 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 ARRB2P32121 409 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 STT3AP46977 705 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 ALDH9A1P49189 494 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 CLCN2P51788 898 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 IGLV3-21P80748 117 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 Q0VFX4 171 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 MAD2L1Q13257 205 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 UGT3A2Q3SY77 523 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 GALNTL6Q49A17 601 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 FAM219BQ5XKK7 198 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 NOXRED1Q6NXP6 359 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 ISLR2Q6UXK2 745 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 OR4N5Q8IXE1 308 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 SLC5A8Q8N695 610 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 ZNF781Q8N8C0 355 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 MORN4Q8NDC4 146 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 DNAJB14Q8TBM8 379 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 BRIX1Q8TDN6 353 aaKnown RBP11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 C16orf78Q8WTQ4 265 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 ANKRD9Q96BM1 317 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 C11orf24Q96F05 449 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 VMP1Q96GC9 406 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 EBPLQ9BY08 206 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 TUBB1Q9H4B7 451 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 ZNF552Q9H707 407 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 ZNF71Q9NQZ8 489 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 ABI3Q9P2A4 366 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 COPS7AQ9UBW8 275 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 HAO1Q9UJM8 370 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 DLGAP4Q9Y2H0 992 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 POLR3HQ9Y535 204 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 ZNF780BQ9Y6R6 833 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 IGSF10Q6WRI0 2623 aa11.94□□□□□ -0.5
TRAPPC1-206ENST00000573989 C17orf105B2RV13 164 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 SLCO1B7G3V0H7 640 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 TGFBR3LH3BV60 316 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 KLF11O14901 512 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 LSM1O15116 133 aaKnown RBP11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 PGRMC2O15173 223 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 SNNO75324 88 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 VPS4BO75351 444 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 IL3P08700 152 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 SLC35E2P0CK97 266 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 ITGAMP11215 1152 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 DDX5P17844 614 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms