RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 NANOGP1Q8N7R0 232 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 RAET1EQ8TD07 263 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 SLC5A11Q8WWX8 675 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 AP2M1Q96CW1 435 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 ST6GAL2Q96JF0 529 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 SLAMF7Q9NQ25 335 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 NFKBIL1Q9UBC1 381 aaPredicted RBP18.14■□□□□ 0.49
SCARF1-206ENST00000573852 GRIP1Q9Y3R0 1128 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 ZNF670-ZNF695F2Z2N8 137 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 H3BN98 237 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 CYP17A1P05093 508 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 PSPHP78330 225 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 GDPGP1Q6ZNW5 385 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 LRRC56Q8IYG6 542 aaPredicted RBP18.13■□□□□ 0.49
SCARF1-206ENST00000573852 RAB8BQ92930 207 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 POLR2J2Q9GZM3 115 aaKnown RBP18.13■□□□□ 0.49
SCARF1-206ENST00000573852 TIGARQ9NQ88 270 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 CCDC177Q9NQR7 707 aaPredicted RBP18.13■□□□□ 0.49
SCARF1-206ENST00000573852 DDX28Q9NUL7 540 aaKnown RBP18.13■□□□□ 0.49
SCARF1-206ENST00000573852 STUB1Q9UNE7 303 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 ITM2BQ9Y287 266 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 HEPACAM2A8MVW5 462 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 CXCL10P02778 98 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 IL7P13232 177 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 XKP51811 444 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 MXD1Q05195 221 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 DCST1Q5T197 706 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 ERAP2Q6P179 960 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 SLC30A8Q8IWU4 369 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 TCEANCQ8N8B7 351 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 OR4D11Q8NGI4 311 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 TMEM19Q96HH6 336 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 MND1Q9BWT6 205 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 TSSK6Q9BXA6 273 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 SRRQ9GZT4 340 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 NDUFB11Q9NX14 153 aa18.13■□□□□ 0.49
SCARF1-206ENST00000573852 A0A1W2PQ09 198 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 C5orf58C9J3I9 102 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 TGM5O43548 720 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 TPST2O60704 377 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 CA8P35219 290 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 MAPK9P45984 424 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 DGKGP49619 791 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 GRIN2CQ14957 1233 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 LIPKQ5VXJ0 399 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 FBXO15Q8NCQ5 510 aaPredicted RBP18.12■□□□□ 0.49
SCARF1-206ENST00000573852 OR9A1PQ8NGU1 263 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 ABCG4Q9H172 646 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 ICKQ9UPZ9 632 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 MGAT4BQ9UQ53 548 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 MTCL1Q9Y4B5 1905 aaKnown RBP18.12■□□□□ 0.49
SCARF1-206ENST00000573852 HYKKA2RU49 373 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 ANKDD1BA6NHY2 528 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 LARS2Q15031 903 aaKnown RBP18.12■□□□□ 0.49
SCARF1-206ENST00000573852 TAB1Q15750 504 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 CASP12Q6UXS9 341 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 LIPIQ6XZB0 460 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 DEF8Q6ZN54 512 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 RAB43Q86YS6 212 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 GPR65Q8IYL9 337 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 CD99L2Q8TCZ2 262 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 DMRTB1Q96MA1 342 aa18.12■□□□□ 0.49
SCARF1-206ENST00000573852 HMX1Q9NP08 348 aaPredicted RBP18.12■□□□□ 0.49
SCARF1-206ENST00000573852 RPL36Q9Y3U8 105 aaKnown RBP18.12■□□□□ 0.49
SCARF1-206ENST00000573852 PLD2O14939 933 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 XPAP23025 273 aaPredicted RBP18.11■□□□□ 0.49
SCARF1-206ENST00000573852 ITGB7P26010 798 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 IRS1P35568 1242 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 MFSD4BQ5TF39 518 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 SAXO2Q658L1 398 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 PGBD2Q6P3X8 592 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 DPPA4Q7L190 304 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 PHC2Q8IXK0 858 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 C2orf73Q8N5S3 287 aaPredicted RBP18.11■□□□□ 0.49
SCARF1-206ENST00000573852 IQCF1Q8N6M8 205 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 NEURL3Q96EH8 262 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 WDFY2Q96P53 400 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 POLR2J3Q9H1A7 115 aaKnown RBP18.11■□□□□ 0.49
SCARF1-206ENST00000573852 SLC35F4A4IF30 521 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 FAM172BPA6NC97 362 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 B4GALT2O60909 372 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 ELFN1P0C7U0 828 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 CCR2P41597 374 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 TRIM69Q86WT6 500 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 ADGRF3Q8IZF5 1079 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 PROKR2Q8NFJ6 384 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 SNX18Q96RF0 628 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 LINC00597Q9H2U6 94 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 A4GALTQ9NPC4 353 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 CMAHPQ9Y471 501 aa18.11■□□□□ 0.49
SCARF1-206ENST00000573852 TSPAN11A1L157 253 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 RTCAO00442 366 aaKnown RBP18.1■□□□□ 0.49
SCARF1-206ENST00000573852 HOXC11O43248 304 aaPredicted RBP18.1■□□□□ 0.49
SCARF1-206ENST00000573852 CDRT1O95170 752 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 LRG1P02750 347 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 TP53P04637 393 aaPredicted RBP18.1■□□□□ 0.49
SCARF1-206ENST00000573852 H1F0P07305 194 aaKnown RBP18.1■□□□□ 0.49
SCARF1-206ENST00000573852 TYRP14679 529 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 RUNX1T1Q06455 604 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 IKBIPQ70UQ0 350 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms