RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 CHN1P15882 459 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 MAOAP21397 527 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 PRPH2P23942 346 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 ARRB2P32121 409 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 RPL14P50914 215 aaKnown RBP12.69□□□□□ -0.38
RPAIN-213ENST00000573577 HNRNPH2P55795 449 aaKnown RBP12.69□□□□□ -0.38
RPAIN-213ENST00000573577 OR4D2P58180 307 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 BTG2P78543 158 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 TLE1Q04724 770 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 BTKQ06187 659 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 BST1Q10588 318 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 STX4Q12846 297 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 SERTAD2Q14140 314 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 PCOLCEQ15113 449 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 UGT3A2Q3SY77 523 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 NADK2Q4G0N4 442 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 GALNT18Q6P9A2 607 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 IGFL3Q6UXB1 125 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 LANCL3Q6ZV70 420 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 KBTBD2Q8IY47 623 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 TM9SF4Q92544 642 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 TSLPQ969D9 159 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 APIPQ96GX9 242 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 THOC3Q96J01 351 aaKnown RBP12.69□□□□□ -0.38
RPAIN-213ENST00000573577 LPAR4Q99677 370 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 FAIM2Q9BWQ8 316 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 TRIM4Q9C037 500 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 MED4Q9NPJ6 270 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 C1orf109Q9NX04 203 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 SIRT5Q9NXA8 310 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 ATG4BQ9Y4P1 393 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 HELZ2Q9BYK8 2649 aaKnown RBP12.68□□□□□ -0.38
RPAIN-213ENST00000573577 SPENQ96T58 3664 aaKnown RBP12.68□□□□□ -0.38
RPAIN-213ENST00000573577 IGKV3D-11A0A0A0MRZ8 115 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 TCRBV16S1A1N1A0A5B0 115 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 TMEM233B4DJY2 109 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 KLF11O14901 512 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 PIP5K1BO14986 540 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 SEC22BO75396 215 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 LINC00032P0C843 101 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 PRR35P0CG20 571 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 TIA1P31483 386 aaKnown RBP eCLIP12.68□□□□□ -0.38
RPAIN-213ENST00000573577 NR6A1Q15406 480 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 EXT1Q16394 746 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 SFT2D3Q587I9 215 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 NDUFAF5Q5TEU4 345 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 AGAP7PQ5VUJ5 663 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 FAM219BQ5XKK7 198 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 OR52E8Q6IFG1 317 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 RIPOR1Q6ZS17 1223 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 RBMXL3Q8N7X1 1067 aaKnown RBP12.68□□□□□ -0.38
RPAIN-213ENST00000573577 ZNF781Q8N8C0 355 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 AGAP4Q96P64 663 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 LRTM1Q9HBL6 345 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 NECTIN3Q9NQS3 549 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 INTS9Q9NV88 658 aaKnown RBP12.68□□□□□ -0.38
RPAIN-213ENST00000573577 HAO1Q9UJM8 370 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 WBP11Q9Y2W2 641 aaKnown RBP12.68□□□□□ -0.38
RPAIN-213ENST00000573577 TMED5Q9Y3A6 229 aa12.68□□□□□ -0.38
RPAIN-213ENST00000573577 TNRC6AQ8NDV7 1962 aaKnown RBP12.68□□□□□ -0.38
RPAIN-213ENST00000573577 IGHV3-20A0A0C4DH32 117 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 A0A1W2PR48 441 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 C1orf226A1L170 272 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 PYCARD-AS1I3L0S3 204 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 SNNO75324 88 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-213ENST00000573577 SEC24DO94855 1032 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-213ENST00000573577 AIFM1O95831 613 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 IFNA16P05015 189 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 SERPINA7P05543 415 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 ANXA4P09525 319 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-213ENST00000573577 CD97P48960 835 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 HNRNPFP52597 415 aaKnown RBP12.67□□□□□ -0.38
RPAIN-213ENST00000573577 ZNF763Q0D2J5 394 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 HEPACAMQ14CZ8 416 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 TERF2Q15554 542 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 ATP6AP1LQ52LC2 224 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 CES4AQ5XG92 561 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 C18orf63Q68DL7 685 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 SLC6A19Q695T7 634 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 JMJD6Q6NYC1 403 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-213ENST00000573577 PAPD4Q6PIY7 484 aaKnown RBP12.67□□□□□ -0.38
RPAIN-213ENST00000573577 Q6ZSR9 355 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 CLNKQ7Z7G1 428 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 TMEM52Q8NDY8 209 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 LRRC8CQ8TDW0 803 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 C19orf60Q96EN9 201 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 C11orf24Q96F05 449 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-213ENST00000573577 IMMP1LQ96LU5 166 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 PPP3R2Q96LZ3 170 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 SORT1Q99523 831 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 PELOQ9BRX2 385 aaKnown RBP12.67□□□□□ -0.38
RPAIN-213ENST00000573577 ALOXE3Q9BYJ1 711 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 C20orf27Q9GZN8 174 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 TUBB1Q9H4B7 451 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 ZBTB20Q9HC78 741 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-213ENST00000573577 ADAP2Q9NPF8 381 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 PSME2Q9UL46 239 aa12.67□□□□□ -0.38
RPAIN-213ENST00000573577 SLCO1B7G3V0H7 640 aa12.66□□□□□ -0.38
RPAIN-213ENST00000573577 LSM1O15116 133 aaKnown RBP12.66□□□□□ -0.38
RPAIN-213ENST00000573577 DYRK3O43781 588 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms