RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 A0A1W2PR48 441 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 A0A1W2PS29 197 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 ENO4A6NNW6 628 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 FAM166BA8MTA8 275 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 PRRG2O14669 202 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 PROM1O43490 865 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 NADKO95544 446 aaPredicted RBP16.76■□□□□ 0.27
CHD3-214ENST00000572579 TUBB4AP04350 444 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 EPB42P16452 691 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 TNNI3P19429 210 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 BSGP35613 385 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 PIK3CBP42338 1070 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 SSR2P43308 183 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 PPIAP62937 165 aaKnown RBP16.76■□□□□ 0.27
CHD3-214ENST00000572579 DDX39BQ13838 428 aaKnown RBP16.76■□□□□ 0.27
CHD3-214ENST00000572579 SERTAD2Q14140 314 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 PCBP2Q15366 365 aaKnown RBP eCLIP16.76■□□□□ 0.27
CHD3-214ENST00000572579 PIGGQ5H8A4 983 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 C9orf40Q8IXQ3 194 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 GPALPP1Q8IXQ4 340 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 WDR20Q8TBZ3 569 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 ANP32BQ92688 251 aaKnown RBP16.76■□□□□ 0.27
CHD3-214ENST00000572579 PPT2Q9UMR5 302 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 RNF11Q9Y3C5 154 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 LIPGQ9Y5X9 500 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 TEP1Q99973 2627 aaKnown RBP16.76■□□□□ 0.27
CHD3-214ENST00000572579 A0A0A6YYD5 115 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 H0YIV9 168 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 OR7A17O14581 309 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 KLHL2O95198 593 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 CLPSP04118 112 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 TPOP07202 933 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 CELA3AP09093 270 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 CCL3P10147 92 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 COX6B1P14854 86 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 POU3F2P20265 443 aaPredicted RBP16.75■□□□□ 0.27
CHD3-214ENST00000572579 PTGER4P35408 488 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 STT3AP46977 705 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 PIK3CGP48736 1102 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 FOLH1Q04609 750 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 ASPHQ12797 758 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 RCN2Q14257 317 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 ACAP2Q15057 778 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 ZNF791Q3KP31 576 aaPredicted RBP16.75■□□□□ 0.27
CHD3-214ENST00000572579 GOLGA7Q7Z5G4 137 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 GPR180Q86V85 440 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 ZCCHC7Q8N3Z6 543 aaKnown RBP16.75■□□□□ 0.27
CHD3-214ENST00000572579 RGMAQ96B86 450 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 TTTY12Q9BZ98 90 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 RPF2Q9H7B2 306 aaKnown RBP16.75■□□□□ 0.27
CHD3-214ENST00000572579 PROK2Q9HC23 129 aa16.75■□□□□ 0.27
CHD3-214ENST00000572579 DMGDHQ9UI17 866 aaKnown RBP16.75■□□□□ 0.27
CHD3-214ENST00000572579 ZNF407Q9C0G0 2248 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 A0A1B0GTL3 188 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 GLOD5A6NK44 160 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 CNR1P21554 472 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 SERPINB1P30740 379 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 MAGEA12P43365 314 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 ALDH18A1P54886 795 aaKnown RBP16.74■□□□□ 0.27
CHD3-214ENST00000572579 CPSF6Q16630 551 aaKnown RBP eCLIP16.74■□□□□ 0.27
CHD3-214ENST00000572579 FAM83EQ2M2I3 478 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 MPEG1Q2M385 716 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 LIPJQ5W064 366 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 TMEM251Q8N6I4 163 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 L3MBTL4Q8NA19 623 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 SDCCAG3Q96C92 435 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 LURAP1Q96LR2 239 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 CDK15Q96Q40 435 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 TREX2Q9BQ50 279 aaPredicted RBP16.74■□□□□ 0.27
CHD3-214ENST00000572579 FUT8Q9BYC5 575 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 ACSS3Q9H6R3 686 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 DDX31Q9H8H2 851 aaKnown RBP16.74■□□□□ 0.27
CHD3-214ENST00000572579 TNFRSF10DQ9UBN6 386 aa16.74■□□□□ 0.27
CHD3-214ENST00000572579 SYCE1LA8MT33 242 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 PGRMC2O15173 223 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 GBAP04062 536 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 GFAPP14136 432 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 ECHS1P30084 290 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 PIGAP37287 484 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 DNASE1L1P49184 302 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 TNFRSF17Q02223 184 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 GTF2H2Q13888 395 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 GXYLT1Q4G148 440 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 TECRLQ5HYJ1 363 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 GTF2H2CQ6P1K8 395 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 ARHGAP11AQ6P4F7 1023 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 RTL4Q6ZR62 310 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 CEP128Q6ZU80 1094 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 MYLK4Q86YV6 388 aaPredicted RBP16.73■□□□□ 0.27
CHD3-214ENST00000572579 RELL1Q8IUW5 271 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 NOA1Q8NC60 698 aaKnown RBP16.73■□□□□ 0.27
CHD3-214ENST00000572579 OR52B6Q8NGF0 335 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 TANKQ92844 425 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 ISL2Q96A47 359 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 NSUN5Q96P11 429 aaKnown RBP16.73■□□□□ 0.27
CHD3-214ENST00000572579 UCK2Q9BZX2 261 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 ENKD1Q9H0I2 346 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 IPPKQ9H8X2 491 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 ACTR8Q9H981 624 aa16.73■□□□□ 0.27
CHD3-214ENST00000572579 ZBTB26Q9HCK0 441 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms