RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 ZNF461Q8TAF7 563 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 C2orf15Q8WU43 125 aaKnown RBP3.35□□□□□ -1.87
CDC27-213ENST00000571643 SCFD1Q8WVM8 642 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 FBXL8Q96CD0 374 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 LRRC39Q96DD0 335 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 C7orf34Q96L11 122 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 ZNF560Q96MR9 790 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 GDAP1L1Q96MZ0 367 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 ZBTB18Q99592 522 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 CCT7Q99832 543 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 PANK2Q9BZ23 570 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 GORASP2Q9H8Y8 452 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 PCDH9Q9HC56 1237 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 NGBQ9NPG2 151 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 DMAC2Q9NW81 257 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 MARCH5Q9NX47 278 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 MIOSQ9NXC5 875 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 DNAJB4Q9UDY4 337 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 FBXW2Q9UKT8 454 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 TCF19Q9Y242 345 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 MRPS7Q9Y2R9 242 aaKnown RBP3.35□□□□□ -1.87
CDC27-213ENST00000571643 STRAPQ9Y3F4 350 aaKnown RBP3.35□□□□□ -1.87
CDC27-213ENST00000571643 HES2Q9Y543 173 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 COMMD3-BMI1R4GMX3 469 aa3.35□□□□□ -1.87
CDC27-213ENST00000571643 A0A087WV48 116 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 C15orf38-AP3S2A0A0A6YYH1 394 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 TRBV2A0A0J9YWF9 115 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 EIF3CLB5ME19 914 aaKnown RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 TEX22C9J3V5 150 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 HSBP1L1C9JCN9 74 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 ANKRD63C9JTQ0 380 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 P2RY10O00398 339 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 PIRO00625 290 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 NTN3O00634 580 aaPredicted RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 SLC30A4O14863 429 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 NVLO15381 856 aaKnown RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 YKT6O15498 198 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 PLRG1O43660 514 aaKnown RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 CALUO43852 315 aaPredicted RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 KLRC4O43908 158 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 GPRIN2O60269 458 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 NDUFS7O75251 213 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 MTX2O75431 263 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 CIB2O75838 187 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 POP4O95707 220 aaKnown RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 FGF19O95750 216 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 GNA14O95837 355 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 AK1P00568 194 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 TGFAP01135 160 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 KRT14P02533 472 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 TNNC2P02585 160 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 IVLP07476 585 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 CXCL8P10145 99 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 ODC1P11926 461 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 ANXA8P13928 327 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 GM2AP17900 193 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 GABRB1P18505 474 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 TRIM21P19474 475 aaKnown RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 CSTF2P33240 577 aaKnown RBP eCLIP3.34□□□□□ -1.871e-6■□□□□ 10.9
CDC27-213ENST00000571643 CPOXP36551 454 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 NUP62P37198 522 aaPredicted RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 PIGAP37287 484 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 PBX3P40426 434 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 LHX1P48742 406 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 CXCR3P49682 368 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 TAF6P49848 677 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 CLCN4P51793 760 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 NAGLUP54802 743 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 NME5P56597 212 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 SEC61BP60468 96 aaKnown RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 ST8SIA6P61647 398 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 UFM1P61960 85 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 PITX1P78337 314 aaPredicted RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 FKBP3Q00688 224 aaKnown RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 LRRC63Q05C16 580 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 NIPAL4Q0D2K0 466 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 RAPSNQ13702 412 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 HNRNPDQ14103 355 aaKnown RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 VEPH1Q14D04 833 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 RCN1Q15293 331 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 PSMD5Q16401 504 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 SNRNP35Q16560 246 aaKnown RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 DPCR1Q3MIW9 517 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 ZC2HC1CQ53FD0 456 aaPredicted RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 KLHL26Q53HC5 615 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 CEP85LQ5SZL2 805 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 LIN9Q5TKA1 542 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 ZNF658Q5TYW1 1059 aaPredicted RBP3.34□□□□□ -1.87
CDC27-213ENST00000571643 ANXA8L1Q5VT79 327 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 ANKRD54Q6NXT1 300 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 C8orf74Q6P047 294 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 SLC39A4Q6P5W5 647 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 CLEC2AQ6UVW9 174 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 MOB3CQ70IA8 216 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 TADA2BQ86TJ2 420 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 SYVN1Q86TM6 617 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 CFAP206Q8IYR0 622 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 ZNF679Q8IYX0 411 aa3.34□□□□□ -1.87
CDC27-213ENST00000571643 FAM9CQ8IZT9 166 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms