RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 HNRNPA0Q13151 305 aaKnown RBP16.62■□□□□ 0.25
SCARF1-205ENST00000571272 CDK10Q15131 360 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 C22orf42Q6IC83 251 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 TCTN3Q6NUS6 607 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 TMCO2Q7Z6W1 182 aaPredicted RBP16.62■□□□□ 0.25
SCARF1-205ENST00000571272 TRIM69Q86WT6 500 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 PHC2Q8IXK0 858 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 SLC43A3Q8NBI5 491 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 GPR32P1Q8NGA4 272 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 BTN2A2Q8WVV5 523 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 ZFYVE19Q96K21 471 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 LMLNQ96KR4 655 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 MND1Q9BWT6 205 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 NLNQ9BYT8 704 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 POLR2J3Q9H1A7 115 aaKnown RBP16.62■□□□□ 0.25
SCARF1-205ENST00000571272 TAAR2Q9P1P5 351 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 KCND3Q9UK17 655 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 TMEM98Q9Y2Y6 226 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 DYRK1BQ9Y463 629 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 A0A1W2PRU2 124 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 HEPACAM2A8MVW5 462 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 MYL12BO14950 172 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 TLX2O43763 284 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-205ENST00000571272 LEFTY1O75610 366 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 CTSAP10619 480 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 POLR2EP19388 210 aaKnown RBP16.61■□□□□ 0.25
SCARF1-205ENST00000571272 SNRPGP62308 76 aaKnown RBP16.61■□□□□ 0.25
SCARF1-205ENST00000571272 TARDBPQ13148 414 aaKnown RBP eCLIP16.61■□□□□ 0.25
SCARF1-205ENST00000571272 ILKQ13418 452 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 ZNF284Q2VY69 593 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 HENMT1Q5T8I9 393 aaKnown RBP16.61■□□□□ 0.25
SCARF1-205ENST00000571272 USP30Q70CQ3 517 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 TRIM48Q8IWZ4 208 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 NANOGP1Q8N7R0 232 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 SORCS1Q8WY21 1168 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 DIRAS2Q96HU8 199 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 C5AR2Q9P296 337 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 YARS2Q9Y2Z4 477 aaKnown RBP16.61■□□□□ 0.25
SCARF1-205ENST00000571272 A0A1W2PQL4 384 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-205ENST00000571272 HYKKA2RU49 373 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 NEDD8-MDP1E9PL57 170 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 LEFTY2O00292 366 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 C1orf105O95561 183 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 C1GALT1C1LP0DN25 315 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 RECQLP46063 649 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-205ENST00000571272 SCN1BQ07699 218 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 HYAL2Q12891 473 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 NCF4Q15080 339 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 ARSIQ5FYB1 569 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 CFAP206Q8IYR0 622 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 TRAM1L1Q8N609 369 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 TMEM169Q96HH4 297 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 TMEM19Q96HH6 336 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 C11orf54Q9H0W9 315 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-205ENST00000571272 ABCG4Q9H172 646 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 MYNNQ9NPC7 610 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 NDUFB11Q9NX14 153 aa16.61■□□□□ 0.25
SCARF1-205ENST00000571272 RPL36Q9Y3U8 105 aaKnown RBP16.61■□□□□ 0.25
SCARF1-205ENST00000571272 GRM6O15303 877 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 NDUFB5O43674 189 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 TMCC2O75069 709 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 CYP2A6P11509 494 aaPredicted RBP16.6■□□□□ 0.25
SCARF1-205ENST00000571272 ZNF30P17039 623 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 OR4D11Q8NGI4 311 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 UBASH3BQ8TF42 649 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 GLYATL1Q969I3 302 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 MIXL1Q9H2W2 232 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 TXNL4BQ9NX01 149 aaKnown RBP16.6■□□□□ 0.25
SCARF1-205ENST00000571272 CARD8Q9Y2G2 431 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 FABP12A6NFH5 140 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 RTCAO00442 366 aaKnown RBP16.6■□□□□ 0.25
SCARF1-205ENST00000571272 PCDH1Q08174 1060 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 RAB33AQ14088 237 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 SNAP47Q5SQN1 464 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 HIST2H2AA3Q6FI13 130 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 GDPGP1Q6ZNW5 385 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 CAMKK1Q8N5S9 505 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 APOBEC4Q8WW27 367 aaKnown RBP16.6■□□□□ 0.25
SCARF1-205ENST00000571272 ZSCAN5AQ9BUG6 496 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 ACAT2Q9BWD1 397 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 SLAMF7Q9NQ25 335 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 CCL26Q9Y258 94 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 PLXND1Q9Y4D7 1925 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 ARRDC5A6NEK1 342 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 CCDC182A6NF36 153 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 HMX3A6NHT5 357 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 FOXE1O00358 373 aaPredicted RBP16.6■□□□□ 0.25
SCARF1-205ENST00000571272 SRPRAP08240 638 aaKnown RBP16.6■□□□□ 0.25
SCARF1-205ENST00000571272 ENDOUP21128 410 aaKnown RBP16.6■□□□□ 0.25
SCARF1-205ENST00000571272 GSTM5P46439 218 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 DGKGP49619 791 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 LSM11P83369 360 aaKnown RBP eCLIP16.6■□□□□ 0.25
SCARF1-205ENST00000571272 CD83Q01151 205 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 SREBF2Q12772 1141 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 PIN1Q13526 163 aaPredicted RBP16.6■□□□□ 0.25
SCARF1-205ENST00000571272 C1DQ13901 141 aaKnown RBP16.6■□□□□ 0.25
SCARF1-205ENST00000571272 HEPACAMQ14CZ8 416 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 MEDAGQ5VYS4 303 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 CYB5D2Q8WUJ1 264 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 PDXPQ96GD0 296 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms