RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 HSD17B3P37058 310 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 SSR4P51571 173 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 ALDH6A1Q02252 535 aaKnown RBP18.86■□□□□ 0.61
CLK3-225ENST00000569063 KRTCAP3Q53RY4 240 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 ZNF678Q5SXM1 525 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 LETMD1Q6P1Q0 360 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 GPALPP1Q8IXQ4 340 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 ZNF321PQ8N8H1 164 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 ZNF721Q8TF20 911 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.86■□□□□ 0.61
CLK3-225ENST00000569063 RELTQ969Z4 430 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 RBM18Q96H35 190 aaKnown RBP18.86■□□□□ 0.61
CLK3-225ENST00000569063 DGAT2Q96PD7 388 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 ELOVL6Q9H5J4 265 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 AHSPQ9NZD4 102 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 ADAM29Q9UKF5 820 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 KLF13Q9Y2Y9 288 aaPredicted RBP18.86■□□□□ 0.61
CLK3-225ENST00000569063 POLEQ07864 2286 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 GOLGA8RI6L899 631 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 PRKRAO75569 313 aaKnown RBP18.85■□□□□ 0.61
CLK3-225ENST00000569063 GPR75O95800 540 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 NR2F6P10588 404 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 PYGBP11216 843 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 ATP5F1P24539 256 aaPredicted RBP18.85■□□□□ 0.61
CLK3-225ENST00000569063 PER3P56645 1201 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 RNF4P78317 190 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 PLIN5Q00G26 463 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 CLCQ05315 142 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.85■□□□□ 0.616e-8■□□□□ 8.3
CLK3-225ENST00000569063 UNC50Q53HI1 259 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 C16orf47Q6ZP98 133 aaPredicted RBP18.85■□□□□ 0.61
CLK3-225ENST00000569063 ST13P4Q8IZP2 240 aaPredicted RBP18.85■□□□□ 0.61
CLK3-225ENST00000569063 CYP4Z2PQ8N1L4 340 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 GPR137Q96N19 417 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 LIN28AQ9H9Z2 209 aaKnown RBP18.85■□□□□ 0.61
CLK3-225ENST00000569063 WDR41Q9HAD4 459 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 BRF2Q9HAW0 419 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 FARSBQ9NSD9 589 aaKnown RBP18.85■□□□□ 0.61
CLK3-225ENST00000569063 COPS7AQ9UBW8 275 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 TBK1Q9UHD2 729 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 TRPS1Q9UHF7 1281 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 DCDC2Q9UHG0 476 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 ZNF225Q9UK10 706 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 SNX6Q9UNH7 406 aa18.85■□□□□ 0.61
CLK3-225ENST00000569063 USP9YO00507 2555 aaPredicted RBP18.85■□□□□ 0.61
CLK3-225ENST00000569063 DYRK3O43781 588 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 SUPT7LO94864 414 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 GBAP04062 536 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 IGKV3-11P04433 115 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 ALOX15P16050 662 aaPredicted RBP18.84■□□□□ 0.61
CLK3-225ENST00000569063 TSPAN8P19075 237 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 IMPDH1P20839 514 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 HK2P52789 917 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 RBPJQ06330 500 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 SGO1Q5FBB7 561 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 DGAT2L6Q6ZPD8 337 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 SLC22A9Q8IVM8 553 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 SIAH3Q8IW03 269 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 METTL4Q8N3J2 472 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 POGLUT1Q8NBL1 392 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 OR5L2Q8NGL0 311 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 TRPC4APQ8TEL6 797 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 PPWD1Q96BP3 646 aaKnown RBP18.84■□□□□ 0.61
CLK3-225ENST00000569063 SENP5Q96HI0 755 aaPredicted RBP18.84■□□□□ 0.61
CLK3-225ENST00000569063 TMEM237Q96Q45 408 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 PELOQ9BRX2 385 aaKnown RBP18.84■□□□□ 0.61
CLK3-225ENST00000569063 MRPL1Q9BYD6 325 aaKnown RBP18.84■□□□□ 0.61
CLK3-225ENST00000569063 PPCSQ9HAB8 311 aa18.84■□□□□ 0.61
CLK3-225ENST00000569063 A0A1W2PPM1 405 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 WASHC1A8K0Z3 465 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 NPIPA5E9PKD4 350 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 KLRC4-KLRK1H3BQV0 150 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 WWP2O00308 870 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 AIFM1O95831 613 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 PDYNP01213 254 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 SHBGP04278 402 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 KLK1P06870 262 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 GALNSP34059 522 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 PRKAA2P54646 552 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 C1QL3Q5VWW1 255 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 SH2D5Q6ZV89 423 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 PAGE2Q7Z2X7 111 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 MDGA2Q7Z553 956 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 TDRPQ86YL5 185 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 SULF2Q8IWU5 870 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 CPSF7Q8N684 471 aaKnown RBP18.83■□□□□ 0.6
CLK3-225ENST00000569063 UBLCP1Q8WVY7 318 aaPredicted RBP18.83■□□□□ 0.6
CLK3-225ENST00000569063 SELENOMQ8WWX9 145 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 ASB15Q8WXK1 588 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 L3HYPDHQ96EM0 354 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 FBXL20Q96IG2 436 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 ART5Q96L15 291 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 RASL10BQ96S79 203 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 ZNF382Q96SR6 550 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 TIMMDC1Q9NPL8 285 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 NPIPA1Q9UND3 350 aa18.83■□□□□ 0.6
CLK3-225ENST00000569063 ZGRF1Q86YA3 2104 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 A1L4Q6 167 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 GLOD5A6NK44 160 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 A8MVJ9 347 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms