RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ZSCAN9O15535 394 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-221ENST00000567935 B3GALT4O96024 378 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 WNT1P04628 370 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 RPSAP08865 295 aaKnown RBP13.84□□□□□ -0.19
COMMD4-221ENST00000567935 POLR2CP19387 275 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-221ENST00000567935 PCGF2P35227 344 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 CCT8P50990 548 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 PLA2G16P53816 162 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 NXPH1P58417 271 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 GAB1Q13480 694 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 MED21Q13503 144 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 SUZ12Q15022 739 aaKnown RBP13.84□□□□□ -0.19
COMMD4-221ENST00000567935 MPEG1Q2M385 716 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-221ENST00000567935 PPP4R4Q6NUP7 873 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 ZBTB49Q6ZSB9 765 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 SAMD14Q8IZD0 417 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-221ENST00000567935 ACOT4Q8N9L9 421 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 FAM181AQ8N9Y4 354 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 OR10G6Q8NH81 332 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 PSMA8Q8TAA3 256 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 BAHD1Q8TBE0 780 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-221ENST00000567935 JPH3Q8WXH2 748 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-221ENST00000567935 RERGQ96A58 199 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-221ENST00000567935 HSPA12BQ96MM6 686 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 OR2A5Q96R48 311 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 ZFYVE21Q9BQ24 234 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 SLC35A5Q9BS91 424 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 CHST8Q9H2A9 424 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 TMEM38AQ9H6F2 299 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 BATF3Q9NR55 127 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 HRASLS2Q9NWW9 162 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 PHF11Q9UIL8 331 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 DOLKQ9UPQ8 538 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 CLOCKO15516 846 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 DENRO43583 198 aaKnown RBP13.83□□□□□ -0.2
COMMD4-221ENST00000567935 PRSS23O95084 383 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 SYPP08247 313 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 ZNF26P17031 533 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-221ENST00000567935 MAGP20916 626 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 NTSP30990 170 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 CHI3L1P36222 383 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-221ENST00000567935 RXRGP48443 463 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 ALDH9A1P49189 494 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 MANFP55145 182 aaKnown RBP13.83□□□□□ -0.2
COMMD4-221ENST00000567935 PCBP4P57723 403 aaKnown RBP13.83□□□□□ -0.2
COMMD4-221ENST00000567935 TXNL4AP83876 142 aaKnown RBP13.83□□□□□ -0.2
COMMD4-221ENST00000567935 SLAMF1Q13291 335 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 BIRC2Q13490 618 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 TCEA2Q15560 299 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 ZNF630Q2M218 657 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-221ENST00000567935 ZNF542PQ5EBM4 170 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 GCNT6Q5T4J0 391 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 NDUFAF5Q5TEU4 345 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 ZNF793Q6ZN11 406 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 RNF44Q7L0R7 432 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 ABHD13Q7L211 337 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 VN1R4Q7Z5H5 301 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 AMIGO2Q86SJ2 522 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 PTOV1Q86YD1 416 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 FAM20CQ8IXL6 584 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 C1orf216Q8TAB5 229 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 CIDECQ96AQ7 238 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-221ENST00000567935 SLC47A1Q96FL8 570 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 PYURFQ96I23 114 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 ZNF597Q96LX8 424 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 SERINC2Q96SA4 455 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 SEPHS2Q99611 448 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 OSBPL11Q9BXB4 747 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 AICDAQ9GZX7 198 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 GIMAP4Q9NUV9 329 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 THUMPD1Q9NXG2 353 aaKnown RBP13.83□□□□□ -0.2
COMMD4-221ENST00000567935 MS4A12Q9NXJ0 267 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 DNAJB9Q9UBS3 223 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 PILRAQ9UKJ1 303 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 POMT2Q9UKY4 750 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 PSME2Q9UL46 239 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 FAF1Q9UNN5 650 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-221ENST00000567935 ERVK-11Q9UQG0 969 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 ZNF451Q9Y4E5 1061 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 ASB4Q9Y574 426 aa13.83□□□□□ -0.2
COMMD4-221ENST00000567935 COL5A1P20908 1838 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-221ENST00000567935 CEP192Q8TEP8 1941 aa13.82□□□□□ -0.2
COMMD4-221ENST00000567935 GOLGA4Q13439 2230 aaKnown RBP13.82□□□□□ -0.2
COMMD4-221ENST00000567935 LMO7DNF2Z398 122 aa13.82□□□□□ -0.2
COMMD4-221ENST00000567935 TXNDC9O14530 226 aa13.82□□□□□ -0.2
COMMD4-221ENST00000567935 TLX3O43711 291 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-221ENST00000567935 DKK1O94907 266 aa13.82□□□□□ -0.2
COMMD4-221ENST00000567935 SERPINA1P01009 418 aa13.82□□□□□ -0.2
COMMD4-221ENST00000567935 IFNA14P01570 189 aa13.82□□□□□ -0.2
COMMD4-221ENST00000567935 CELA2BP08218 269 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-221ENST00000567935 SMIM10L1P0DMW3 83 aa13.82□□□□□ -0.2
COMMD4-221ENST00000567935 KDELR2P33947 212 aa13.82□□□□□ -0.2
COMMD4-221ENST00000567935 EIF2S3P41091 472 aaKnown RBP13.82□□□□□ -0.2
COMMD4-221ENST00000567935 ANXA11P50995 505 aaKnown RBP13.82□□□□□ -0.2
COMMD4-221ENST00000567935 C21orf59P57076 290 aa13.82□□□□□ -0.2
COMMD4-221ENST00000567935 MRPS35P82673 323 aaKnown RBP13.82□□□□□ -0.2
COMMD4-221ENST00000567935 C1orf61Q13536 156 aa13.82□□□□□ -0.2
COMMD4-221ENST00000567935 FCRL6Q6DN72 434 aa13.82□□□□□ -0.2
COMMD4-221ENST00000567935 FBXO42Q6P3S6 717 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms