RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ASMTP46597 345 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 ALDH9A1P49189 494 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 HNRNPFP52597 415 aaKnown RBP11.41□□□□□ -0.58
SF3B3-208ENST00000567250 EFNA3P52797 238 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 POLE2P56282 527 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 TAS2R50P59544 299 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 IGLV3-21P80748 117 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-208ENST00000567250 FOLH1Q04609 750 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 PCOLCEQ15113 449 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 ELAVL1Q15717 326 aaKnown RBP11.41□□□□□ -0.58
SF3B3-208ENST00000567250 SMU1Q2TAY7 513 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 CPZQ66K79 652 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 C18orf63Q68DL7 685 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 NOXRED1Q6NXP6 359 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 SLC48A1Q6P1K1 146 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 ATG14Q6ZNE5 492 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 Q6ZSR9 355 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 WDR75Q8IWA0 830 aaKnown RBP11.41□□□□□ -0.58
SF3B3-208ENST00000567250 SAMD14Q8IZD0 417 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-208ENST00000567250 FNDC5Q8NAU1 212 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 TMEM52Q8NDY8 209 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 OR14A16Q8NHC5 309 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 CDC26Q8NHZ8 85 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 DAZLQ92904 295 aaKnown RBP11.41□□□□□ -0.58
SF3B3-208ENST00000567250 ART5Q96L15 291 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 MAGEB18Q96M61 343 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 DGAT2Q96PD7 388 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 UBL7Q96S82 380 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-208ENST00000567250 ZNF395Q9H8N7 513 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-208ENST00000567250 MIEF1Q9NQG6 463 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 GIMAP4Q9NUV9 329 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 EHD3Q9NZN3 535 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 DLGAP4Q9Y2H0 992 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 PCDHA9Q9Y5H5 950 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 PTGDR2Q9Y5Y4 395 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 ATMQ13315 3056 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 CPAMD8Q8IZJ3 1885 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 OR2W5A6NFC9 320 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 FGF17O60258 216 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 SEC24DO94855 1032 aaPredicted RBP11.4□□□□□ -0.58
SF3B3-208ENST00000567250 SERPINA7P05543 415 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 IL3P08700 152 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 ALOX15P16050 662 aaPredicted RBP11.4□□□□□ -0.58
SF3B3-208ENST00000567250 RPL3P39023 403 aaKnown RBP11.4□□□□□ -0.58
SF3B3-208ENST00000567250 SOX8P57073 446 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 RAE1P78406 368 aaKnown RBP11.4□□□□□ -0.58
SF3B3-208ENST00000567250 CHAF1BQ13112 559 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 KIAA0040Q15053 153 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 BTBD16Q32M84 506 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 PLAG1Q6DJT9 500 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 JMJD6Q6NYC1 403 aaPredicted RBP11.4□□□□□ -0.58
SF3B3-208ENST00000567250 RGS9BPQ6ZS82 235 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 TMEM151BQ8IW70 566 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 KBTBD2Q8IY47 623 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 ST13P4Q8IZP2 240 aaPredicted RBP11.4□□□□□ -0.58
SF3B3-208ENST00000567250 FAM9CQ8IZT9 166 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 SHISA5Q8N114 240 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 GALNT16Q8N428 558 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 OR4K14Q8NGD5 310 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 DNAJB14Q8TBM8 379 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 C16orf78Q8WTQ4 265 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 CKAP2Q8WWK9 683 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 TTC9Q92623 222 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 TM4SF18Q96CE8 201 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 KLHL29Q96CT2 875 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 WBP1Q96G27 269 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 RBM18Q96H35 190 aaKnown RBP11.4□□□□□ -0.58
SF3B3-208ENST00000567250 FCRL1Q96LA6 429 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 ALOXE3Q9BYJ1 711 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 NUF2Q9BZD4 464 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 LHPPQ9H008 270 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 MEAF6Q9HAF1 191 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 PNO1Q9NRX1 252 aaKnown RBP11.4□□□□□ -0.58
SF3B3-208ENST00000567250 GPR83Q9NYM4 423 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 NOP53Q9NZM5 478 aaKnown RBP11.4□□□□□ -0.58
SF3B3-208ENST00000567250 COPS7AQ9UBW8 275 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 MARCOQ9UEW3 520 aaPredicted RBP11.4□□□□□ -0.58
SF3B3-208ENST00000567250 ENTPD4Q9Y227 616 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 EIF3LQ9Y262 564 aaKnown RBP11.4□□□□□ -0.58
SF3B3-208ENST00000567250 PCDHGB7Q9Y5F8 929 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 PCDHGA9Q9Y5G4 932 aaKnown RBP11.4□□□□□ -0.58
SF3B3-208ENST00000567250 CLCA3PQ9Y6N3 262 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 ZNF780BQ9Y6R6 833 aa11.4□□□□□ -0.58
SF3B3-208ENST00000567250 ATP6AP2A0A1C7CYW4 349 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 GLOD5A6NK44 160 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 OR10H2O60403 315 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 PEX11AO75192 247 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 PRKRAO75569 313 aaKnown RBP11.39□□□□□ -0.59
SF3B3-208ENST00000567250 ATP6AP2O75787 350 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 GPR75O95800 540 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 KITP10721 976 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 PRPS2P11908 318 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 PCSK2P16519 638 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 TNNI3P19429 210 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 DDCP20711 480 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 HPCAL1P37235 193 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 STT3AP46977 705 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 CCL11P51671 97 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 SLC26A5P58743 744 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 ERVK-8P63133 956 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms