RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 CDC40O60508 579 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLN6-207ENST00000566347 ETHE1O95571 254 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 COX6B1P14854 86 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 BUD31P41223 144 aaPredicted RBP18.7■□□□□ 0.58
CLN6-207ENST00000566347 PLIN5Q00G26 463 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 ARHGAP11AQ6P4F7 1023 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 PAOXQ6QHF9 649 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 OPN5Q6U736 354 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 GOLGA7Q7Z5G4 137 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 SRRM1Q8IYB3 904 aaKnown RBP18.7■□□□□ 0.58
CLN6-207ENST00000566347 RNF175Q8N4F7 328 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 GOLM1Q8NBJ4 401 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 OR2M7Q8NG81 312 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 ZNF721Q8TF20 911 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 ART5Q96L15 291 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 C16orf45Q96MC5 204 aaPredicted RBP18.7■□□□□ 0.58
CLN6-207ENST00000566347 DMRTA2Q96SC8 542 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 FUT8Q9BYC5 575 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 VPS11Q9H270 941 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 IPPKQ9H8X2 491 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 PLSCR2Q9NRY7 297 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 DEPPQ9NTK1 212 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 LYARQ9NX58 379 aaKnown RBP18.7■□□□□ 0.58
CLN6-207ENST00000566347 PSD3Q9NYI0 1048 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 TMCO1Q9UM00 188 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 CACNA1CQ13936 2221 aa18.7■□□□□ 0.58
CLN6-207ENST00000566347 TPOP07202 933 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 INHBAP08476 426 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 RPS13P62277 151 aaKnown RBP18.69■□□□□ 0.58
CLN6-207ENST00000566347 PLGLB1Q02325 96 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 FOLH1Q04609 750 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 CUL3Q13618 768 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 CPSF6Q16630 551 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLN6-207ENST00000566347 MPEG1Q2M385 716 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 TECRLQ5HYJ1 363 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 GK5Q6ZS86 529 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 TAOK1Q7L7X3 1001 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 CD163Q86VB7 1156 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 OR4N5Q8IXE1 308 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 L3MBTL4Q8NA19 623 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 NUBPLQ8TB37 319 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 SLC44A1Q8WWI5 657 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 MTFMTQ96DP5 389 aaKnown RBP18.69■□□□□ 0.58
CLN6-207ENST00000566347 SENP5Q96HI0 755 aaPredicted RBP18.69■□□□□ 0.58
CLN6-207ENST00000566347 PELOQ9BRX2 385 aaKnown RBP18.69■□□□□ 0.58
CLN6-207ENST00000566347 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLN6-207ENST00000566347 PPT2Q9UMR5 302 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 ATG4BQ9Y4P1 393 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 IKBKGQ9Y6K9 419 aa18.69■□□□□ 0.58
CLN6-207ENST00000566347 LRRC14BA6NHZ5 514 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 FOXE1O00358 373 aaPredicted RBP18.68■□□□□ 0.58
CLN6-207ENST00000566347 ADAM10O14672 748 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 PROM1O43490 865 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 CLDN9O95484 217 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 RBP1P09455 135 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 ALOX15P16050 662 aaPredicted RBP18.68■□□□□ 0.58
CLN6-207ENST00000566347 SERPINB9P50453 376 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 HNRNPH2P55795 449 aaKnown RBP18.68■□□□□ 0.58
CLN6-207ENST00000566347 PPIAP62937 165 aaKnown RBP18.68■□□□□ 0.58
CLN6-207ENST00000566347 NDUFAF5Q5TEU4 345 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 C3P1Q6ZMU1 363 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 GDF7Q7Z4P5 450 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 SLC22A16Q86VW1 577 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 ST13P4Q8IZP2 240 aaPredicted RBP18.68■□□□□ 0.58
CLN6-207ENST00000566347 MMGT1Q8N4V1 131 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 OR52N2Q8NGI0 321 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 SREK1Q8WXA9 508 aaKnown RBP18.68■□□□□ 0.58
CLN6-207ENST00000566347 ISL2Q96A47 359 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 FBXL20Q96IG2 436 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 SCYL1Q96KG9 808 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 FAM173AQ9BQD7 235 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 CDC42EP4Q9H3Q1 356 aaKnown RBP18.68■□□□□ 0.58
CLN6-207ENST00000566347 DDX31Q9H8H2 851 aaKnown RBP18.68■□□□□ 0.58
CLN6-207ENST00000566347 RYDENQ9NUL5 291 aaKnown RBP18.68■□□□□ 0.58
CLN6-207ENST00000566347 COQ3Q9NZJ6 369 aa18.68■□□□□ 0.58
CLN6-207ENST00000566347 A0A0A6YYD5 115 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 SIX3O95343 332 aaPredicted RBP18.67■□□□□ 0.58
CLN6-207ENST00000566347 ACSL3O95573 720 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 IGKV3-11P04433 115 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 CNR1P21554 472 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 MAGEA12P43365 314 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 TSNAXIP1Q2TAA8 658 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 ZNF750Q32MQ0 723 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 PIGGQ5H8A4 983 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 C18orf63Q68DL7 685 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 TMEM211Q6ICI0 200 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 MRM1Q6IN84 353 aaKnown RBP18.67■□□□□ 0.58
CLN6-207ENST00000566347 CYP20A1Q6UW02 462 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 NCCRP1Q6ZVX7 275 aaPredicted RBP18.67■□□□□ 0.58
CLN6-207ENST00000566347 NUDT13Q86X67 352 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 PTGR2Q8N8N7 351 aaPredicted RBP18.67■□□□□ 0.58
CLN6-207ENST00000566347 MNS1Q8NEH6 495 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 WDR20Q8TBZ3 569 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 SLC22A8Q8TCC7 542 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 ATP6V1E2Q96A05 226 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 FMO2Q99518 471 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 ZNF717Q9BY31 904 aaPredicted RBP18.67■□□□□ 0.58
CLN6-207ENST00000566347 TTTY12Q9BZ98 90 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 TP63Q9H3D4 680 aaPredicted RBP18.67■□□□□ 0.58
CLN6-207ENST00000566347 ZDHHC11Q9H8X9 412 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms