RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 SMPD4Q9NXE4 827 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 MYEF2Q9P2K5 600 aaKnown RBP2.92□□□□□ -1.94
CHD9-216ENST00000565803 RHCGQ9UBD6 479 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 POLKQ9UBT6 870 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 ZNF639Q9UID6 485 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 CDH22Q9UJ99 828 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 SIT1Q9Y3P8 196 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 CDY1Q9Y6F8 540 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 FAM237AA0A1B0GTK4 181 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 TMEM191CA6NGB0 347 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 OR2AT4A6NND4 320 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 GAS2O43903 313 aaKnown RBP2.92□□□□□ -1.94
CHD9-216ENST00000565803 KLK8O60259 260 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 OR2J3O76001 311 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 CIAO1O76071 339 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 TIMP1P01033 207 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 NUDT17P0C025 328 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 CEACAM1P13688 526 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 SLC8A1P32418 973 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 OR1D2P34982 312 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 PBX1P40424 430 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 CHRNA4P43681 627 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 MAP2K3P46734 347 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 GLRBP48167 497 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 MYBPC1Q00872 1141 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 IRF8Q02556 426 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 CRYZQ08257 329 aaKnown RBP2.92□□□□□ -1.94
CHD9-216ENST00000565803 ILF3Q12906 894 aaKnown RBP eCLIP2.92□□□□□ -1.94
CHD9-216ENST00000565803 NDUFA5Q16718 116 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 KCTD19Q17RG1 926 aaPredicted RBP2.92□□□□□ -1.94
CHD9-216ENST00000565803 RGS21Q2M5E4 152 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 WDR72Q3MJ13 1102 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 NKAIN1Q4KMZ8 207 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 ATP13A5Q4VNC0 1218 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 DCAF6Q58WW2 860 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 HP1BP3Q5SSJ5 553 aaPredicted RBP2.92□□□□□ -1.94
CHD9-216ENST00000565803 SERTAD4-AS1Q5TG53 156 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 ZNF691Q5VV52 312 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 HACD4Q5VWC8 232 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 ALS2CLQ60I27 953 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 RHBDD2Q6NTF9 364 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 ZNF790Q6PG37 636 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 PAOXQ6QHF9 649 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 LCTLQ6UWM7 567 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 DBX2Q6ZNG2 339 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 C1orf229Q6ZS94 237 aaPredicted RBP2.92□□□□□ -1.94
CHD9-216ENST00000565803 FAM122BQ7Z309 247 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 HAPLN4Q86UW8 402 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 ERICH1Q86X53 443 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.92□□□□□ -1.94
CHD9-216ENST00000565803 PTGR2Q8N8N7 351 aaPredicted RBP2.92□□□□□ -1.94
CHD9-216ENST00000565803 ACBD4Q8NC06 268 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 FBXO36Q8NEA4 188 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 FAM83FQ8NEG4 500 aaPredicted RBP2.92□□□□□ -1.94
CHD9-216ENST00000565803 BLOC1S5Q8TDH9 187 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 MAFIPQ8WZ33 124 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 ST8SIA2Q92186 375 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 ABHD17AQ96GS6 310 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 PLEKHA8Q96JA3 519 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 HARBI1Q96MB7 349 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 TEFMQ96QE5 360 aaKnown RBP2.92□□□□□ -1.94
CHD9-216ENST00000565803 TRIB1Q96RU8 372 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 PCDHB18PQ96TA0 734 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 CMKLR1Q99788 373 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 DGCR6LQ9BY27 220 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 SRRQ9GZT4 340 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 COA1Q9GZY4 146 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 CATSPERBQ9H7T0 1116 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 METTL8Q9H825 291 aaKnown RBP2.92□□□□□ -1.94
CHD9-216ENST00000565803 SUGCTQ9HAC7 445 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 ZFP14Q9HCL3 533 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 TMLHEQ9NVH6 421 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 ERVK13-1Q9NX77 482 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 SLCO1C1Q9NYB5 712 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 HESX1Q9UBX0 185 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 SIX4Q9UIU6 781 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 MROH7-TTC4A0A0A0MT08 1334 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 MROH7Q68CQ1 1323 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 A0A1B0GVM2 712 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 FUOMA2VDF0 154 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 FAM149AA5PLN7 773 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 MGAT4DA6NG13 374 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 MARCH11A6NNE9 402 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 M0QZ92 97 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 KLF11O14901 512 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 CASKO14936 926 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 ANKRD28O15084 1053 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 STX7O15400 261 aaKnown RBP2.92□□□□□ -1.94
CHD9-216ENST00000565803 SEC14L5O43304 696 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 SSX4O60224 188 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 STX10O60499 249 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 SMIM24O75264 130 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 CSO75390 466 aaKnown RBP2.92□□□□□ -1.94
CHD9-216ENST00000565803 CCNKO75909 580 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 VNN1O95497 513 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 EGFP01133 1207 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 GSTA2P09210 222 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 ANXA4P09525 319 aaPredicted RBP2.92□□□□□ -1.94
CHD9-216ENST00000565803 CRABP2P29373 138 aa2.92□□□□□ -1.94
CHD9-216ENST00000565803 CD80P33681 288 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms