RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SIRT5Q9NXA8 310 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 TEX10Q9NXF1 929 aaPredicted RBP14.97□□□□□ -0.01
RAB40C-208ENST00000564703 VTI1BQ9UEU0 232 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 TEKT2Q9UIF3 430 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 PCDHA9Q9Y5H5 950 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 MYOCOSA0A1B0GUC4 107 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 A8MUI8 341 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 PIP5K1BO14986 540 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 PGRMC2O15173 223 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 ATP8B1O43520 1251 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 FGF17O60258 216 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 OR10H2O60403 315 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 DRD2P14416 443 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 SLC26A5P58743 744 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 TAS2R50P59544 299 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 FOLH1Q04609 750 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 ELAVL1Q15717 326 aaKnown RBP14.96□□□□□ -0.01
RAB40C-208ENST00000564703 GALNTL6Q49A17 601 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 LACTB2Q53H82 288 aaPredicted RBP14.96□□□□□ -0.01
RAB40C-208ENST00000564703 VWA5B1Q5TIE3 1220 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 NOXRED1Q6NXP6 359 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 Q6ZSR9 355 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 ASB18Q6ZVZ8 466 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 ZNF781Q8N8C0 355 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 EBPLQ9BY08 206 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 TUBB1Q9H4B7 451 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 INTS9Q9NV88 658 aaKnown RBP14.96□□□□□ -0.01
RAB40C-208ENST00000564703 C5AR2Q9P296 337 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 DLGAP4Q9Y2H0 992 aa14.96□□□□□ -0.01
RAB40C-208ENST00000564703 WBP11Q9Y2W2 641 aaKnown RBP14.96□□□□□ -0.01
RAB40C-208ENST00000564703 MGAQ8IWI9 3026 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 CROCCQ5TZA2 2017 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 SAGE2PA6NJ88 616 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 SKAP2O75563 359 aaPredicted RBP14.95□□□□□ -0.02
RAB40C-208ENST00000564703 PRKRAO75569 313 aaKnown RBP14.95□□□□□ -0.02
RAB40C-208ENST00000564703 ERAL1O75616 437 aaKnown RBP14.95□□□□□ -0.02
RAB40C-208ENST00000564703 ALOX15P16050 662 aaPredicted RBP14.95□□□□□ -0.02
RAB40C-208ENST00000564703 PRPH2P23942 346 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 MAPK1P28482 360 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 ARRB2P32121 409 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 XKP51811 444 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 RAE1P78406 368 aaKnown RBP14.95□□□□□ -0.02
RAB40C-208ENST00000564703 PLIN5Q00G26 463 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 ZNF763Q0D2J5 394 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 C2orf80Q0P641 193 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 Q0VFX4 171 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 TERF2Q15554 542 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 ATP6AP1LQ52LC2 224 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 ISLR2Q6UXK2 745 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 HPS6Q86YV9 775 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 CDC26Q8NHZ8 85 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 DNAJB14Q8TBM8 379 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 LRRC8CQ8TDW0 803 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 C16orf78Q8WTQ4 265 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 ZNF75CPQ92670 426 aaPredicted RBP14.95□□□□□ -0.02
RAB40C-208ENST00000564703 TUBGCP3Q96CW5 907 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 LMF1Q96S06 567 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 SMAD5Q99717 465 aaKnown RBP14.95□□□□□ -0.02
RAB40C-208ENST00000564703 WDR77Q9BQA1 342 aaPredicted RBP14.95□□□□□ -0.02
RAB40C-208ENST00000564703 NUDT9Q9BW91 350 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 C20orf27Q9GZN8 174 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 EPS8L2Q9H6S3 715 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 ZNF552Q9H707 407 aaPredicted RBP14.95□□□□□ -0.02
RAB40C-208ENST00000564703 MMP25Q9NPA2 562 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 ZNF446Q9NWS9 450 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 PTGFRNQ9P2B2 879 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 TP53TG5Q9Y2B4 290 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 TMED5Q9Y3A6 229 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 CCL27Q9Y4X3 112 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 POLR3HQ9Y535 204 aaPredicted RBP14.95□□□□□ -0.02
RAB40C-208ENST00000564703 PTGDR2Q9Y5Y4 395 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 ZNF780BQ9Y6R6 833 aa14.95□□□□□ -0.02
RAB40C-208ENST00000564703 WASHC1A8K0Z3 465 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 C17orf105B2RV13 164 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 NPIPB8E9PQR5 432 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 SLCO1B7G3V0H7 640 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 PEX11AO75192 247 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 IL3P08700 152 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 SLC35E2P0CK97 266 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 STT3AP46977 705 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 CLCN2P51788 898 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 CRB2Q5IJ48 1285 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 C6orf163Q5TEZ5 329 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 CES4AQ5XG92 561 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 SLC48A1Q6P1K1 146 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 PCSK4Q6UW60 755 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 ATG14Q6ZNE5 492 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 SAMD14Q8IZD0 417 aaPredicted RBP14.94□□□□□ -0.02
RAB40C-208ENST00000564703 ST13P4Q8IZP2 240 aaPredicted RBP14.94□□□□□ -0.02
RAB40C-208ENST00000564703 ZADH2Q8N4Q0 377 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 TEX19Q8NA77 164 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 MORN4Q8NDC4 146 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 B3GNT7Q8NFL0 401 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 OR14A16Q8NHC5 309 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 SORT1Q99523 831 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 DEFB126Q9BYW3 111 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 GIMAP4Q9NUV9 329 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 STMN3Q9NZ72 180 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 DOCK10Q96BY6 2186 aa14.94□□□□□ -0.02
RAB40C-208ENST00000564703 CACNA1GO43497 2377 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms