RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 BTNL10A8MVZ5 291 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 HAUS5O94927 633 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 C1QAP02745 245 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 COX7A2P14406 83 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 SERPINB3P29508 390 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 SLC1A2P43004 574 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 MSH2P43246 934 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 PTH2RP49190 550 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 PLA2G16P53816 162 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 AP1S2P56377 157 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 SARNPP82979 210 aaKnown RBP6.71□□□□□ -1.34
VPS4A-203ENST00000564399 CDK16Q00536 496 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 ID2Q02363 134 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 FOXF2Q12947 444 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 TBX2Q13207 712 aaPredicted RBP6.71□□□□□ -1.34
VPS4A-203ENST00000564399 SERTAD2Q14140 314 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 EFTUD2Q15029 972 aaKnown RBP eCLIP6.71□□□□□ -1.34
VPS4A-203ENST00000564399 VASNQ6EMK4 673 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 ADGRD1Q6QNK2 874 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 PAQR3Q6TCH7 311 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 NXPE4Q6UWF7 544 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 C4orf22Q6V702 233 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 C20orf204Q6ZNR8 217 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 KIAA1328Q86T90 577 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 KLHDC8AQ8IYD2 350 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 C9orf106Q8NAJ2 232 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 OR10G3Q8NGC4 313 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 MBD3L2Q8NHZ7 208 aaPredicted RBP6.71□□□□□ -1.34
VPS4A-203ENST00000564399 CALML6Q8TD86 181 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 FBXL8Q96CD0 374 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 LINGO1Q96FE5 620 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 ZNF597Q96LX8 424 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 CSF3RQ99062 836 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 NDNQ99608 321 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 PRDM14Q9GZV8 571 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 COPS7BQ9H9Q2 264 aaPredicted RBP6.71□□□□□ -1.34
VPS4A-203ENST00000564399 CALHM2Q9HA72 323 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 PRM3Q9NNZ6 103 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 SH2D2AQ9NP31 389 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 TAS2R13Q9NYV9 303 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 FBXO5Q9UKT4 447 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 NPFFR2Q9Y5X5 522 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 CR1P17927 2039 aa6.71□□□□□ -1.34
VPS4A-203ENST00000564399 TCRBV7S3A2A0A539 114 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 CYR61O00622 381 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 SNPHO15079 494 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 CTIFO43310 598 aaKnown RBP6.7□□□□□ -1.34
VPS4A-203ENST00000564399 DYRK3O43781 588 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 LDB3O75112 727 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 H2AFYO75367 372 aaKnown RBP6.7□□□□□ -1.34
VPS4A-203ENST00000564399 ETHE1O95571 254 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 TP53P04637 393 aaPredicted RBP6.7□□□□□ -1.34
VPS4A-203ENST00000564399 CYP4B1P13584 511 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 TPSB2P20231 275 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 CERS1P27544 350 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 HNRNPH1P31943 449 aaKnown RBP6.7□□□□□ -1.34
VPS4A-203ENST00000564399 CPOXP36551 454 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 MASP1P48740 699 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 NR1H2P55055 460 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 DIO3P55073 304 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 MTTPP55157 894 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 LIM2P55344 173 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 IL2P60568 153 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 DMTNQ08495 405 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 TPSAB1Q15661 275 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 C10orf62Q5T681 223 aaPredicted RBP6.7□□□□□ -1.34
VPS4A-203ENST00000564399 HEPHL1Q6MZM0 1159 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 TRIM40Q6P9F5 258 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 THOC6Q86W42 341 aaKnown RBP6.7□□□□□ -1.34
VPS4A-203ENST00000564399 LMNTD2Q8IXW0 634 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 SLC15A4Q8N697 577 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 ZNF441Q8N8Z8 693 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 TTLQ8NG68 377 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 PPP1R14CQ8TAE6 165 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 NUBPLQ8TB37 319 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 ZNF721Q8TF20 911 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 DIO2Q92813 273 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 ABTB1Q969K4 478 aaPredicted RBP6.7□□□□□ -1.34
VPS4A-203ENST00000564399 INTS12Q96CB8 462 aaKnown RBP6.7□□□□□ -1.34
VPS4A-203ENST00000564399 MS4A6EQ96DS6 147 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 WDYHV1Q96HA8 205 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 SENP5Q96HI0 755 aaPredicted RBP6.7□□□□□ -1.34
VPS4A-203ENST00000564399 GAL3ST4Q96RP7 486 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 SERINC2Q96SA4 455 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 MED18Q9BUE0 208 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 SFXN3Q9BWM7 321 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 UGT2B28Q9BY64 529 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 GSX2Q9BZM3 304 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 PROK2Q9HC23 129 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 C20orf96Q9NUD7 363 aaPredicted RBP6.7□□□□□ -1.34
VPS4A-203ENST00000564399 KLHL28Q9NXS3 571 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 ZNF226Q9NYT6 803 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 DAPP1Q9UN19 280 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 SLC22A14Q9Y267 594 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 TESMINQ9Y4I5 508 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 CHCHD2Q9Y6H1 151 aaPredicted RBP6.7□□□□□ -1.34
VPS4A-203ENST00000564399 KCNE2Q9Y6J6 123 aa6.7□□□□□ -1.34
VPS4A-203ENST00000564399 ZCWPW2A0A1B0GU75 182 aa6.69□□□□□ -1.34
VPS4A-203ENST00000564399 MAGEB16A2A368 324 aa6.69□□□□□ -1.34
VPS4A-203ENST00000564399 LRIT2A6NDA9 550 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms