RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 PCNAP12004 261 aa19.29■□□□□ 0.68
HERC2-204ENST00000563945 TLX1P31314 330 aaPredicted RBP19.29■□□□□ 0.68
HERC2-204ENST00000563945 FOXO1Q12778 655 aa19.29■□□□□ 0.68
HERC2-204ENST00000563945 RIPPLY2Q5TAB7 128 aa19.29■□□□□ 0.68
HERC2-204ENST00000563945 RTL6Q6ICC9 239 aa19.29■□□□□ 0.68
HERC2-204ENST00000563945 CAPN12Q6ZSI9 719 aa19.29■□□□□ 0.68
HERC2-204ENST00000563945 GOT1L1Q8NHS2 421 aaPredicted RBP19.29■□□□□ 0.68
HERC2-204ENST00000563945 NUBPLQ8TB37 319 aa19.29■□□□□ 0.68
HERC2-204ENST00000563945 ZNF721Q8TF20 911 aa19.29■□□□□ 0.68
HERC2-204ENST00000563945 WDR34Q96EX3 536 aa19.29■□□□□ 0.68
HERC2-204ENST00000563945 FOXC2Q99958 501 aa19.29■□□□□ 0.68
HERC2-204ENST00000563945 CENPKQ9BS16 269 aa19.29■□□□□ 0.68
HERC2-204ENST00000563945 CCM2LQ9NUG4 571 aaPredicted RBP19.29■□□□□ 0.68
HERC2-204ENST00000563945 MS4A12Q9NXJ0 267 aa19.29■□□□□ 0.68
HERC2-204ENST00000563945 MTO1Q9Y2Z2 717 aaKnown RBP19.29■□□□□ 0.68
HERC2-204ENST00000563945 L3MBTL1Q9Y468 752 aa19.29■□□□□ 0.68
HERC2-204ENST00000563945 IQANK1A0A1B0GTG1 560 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 HSPB2A8KAH6 182 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 RTCAO00442 366 aaKnown RBP19.28■□□□□ 0.68
HERC2-204ENST00000563945 SEC31AO94979 1220 aaKnown RBP19.28■□□□□ 0.68
HERC2-204ENST00000563945 TGFB1P01137 390 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 STMN1P16949 149 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 HIST1H1TP22492 207 aaPredicted RBP19.28■□□□□ 0.68
HERC2-204ENST00000563945 UQCRC1P31930 480 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 STT3AP46977 705 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 HSPB2Q16082 182 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 MED27Q6P2C8 311 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 LIX1LQ8IVB5 337 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 OR4N5Q8IXE1 308 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 ZBED8Q8IZ13 594 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 SLC15A4Q8N697 577 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 EXT2Q93063 718 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 ANKRD9Q96BM1 317 aaPredicted RBP19.28■□□□□ 0.68
HERC2-204ENST00000563945 JSRP1Q96MG2 331 aaPredicted RBP19.28■□□□□ 0.68
HERC2-204ENST00000563945 CNPPD1Q9BV87 410 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 MS4A8Q9BY19 250 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 CAB39LQ9H9S4 337 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 ZFP64Q9NPA5 681 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 SEMA4BQ9NPR2 832 aaPredicted RBP19.28■□□□□ 0.68
HERC2-204ENST00000563945 ZFHX3Q15911 3703 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 EML6Q6ZMW3 1958 aa19.28■□□□□ 0.68
HERC2-204ENST00000563945 NF1P21359 2839 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 FAM221AA4D161 298 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 EFCAB8A8MWE9 144 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 PHGDHO43175 533 aaKnown RBP19.27■□□□□ 0.68
HERC2-204ENST00000563945 ZNF354AO60765 605 aaPredicted RBP19.27■□□□□ 0.68
HERC2-204ENST00000563945 PRAMEF4O60810 478 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 CTAG2O75638 210 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 DNASE1P24855 282 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 SERPINB3P29508 390 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 ADH7P40394 386 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 RAP1GDS1P52306 607 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 DLX5P56178 289 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 PLIN5Q00G26 463 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 SLAMF1Q13291 335 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 FASTKD3Q14CZ7 662 aaKnown RBP19.27■□□□□ 0.68
HERC2-204ENST00000563945 TBCCQ15814 346 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 PRAMEF20Q5VT98 475 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 PRAMEF9Q5VWM5 478 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 ZNF793Q6ZN11 406 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 SLC29A4Q7RTT9 530 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 LRRC70Q7Z2Q7 622 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 UBE3DQ7Z6J8 389 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 DND1Q8IYX4 353 aaKnown RBP19.27■□□□□ 0.68
HERC2-204ENST00000563945 FBXW8Q8N3Y1 598 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 FAM13CQ8NE31 585 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 ZNF473Q8WTR7 871 aaKnown RBP19.27■□□□□ 0.68
HERC2-204ENST00000563945 PYROXD1Q8WU10 500 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 TANKQ92844 425 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 CMTM7Q96FZ5 175 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 TMUB1Q9BVT8 246 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 CD244Q9BZW8 370 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 RPF2Q9H7B2 306 aaKnown RBP19.27■□□□□ 0.68
HERC2-204ENST00000563945 CNIH4Q9P003 139 aa19.27■□□□□ 0.68
HERC2-204ENST00000563945 PTBP2Q9UKA9 531 aaKnown RBP19.27■□□□□ 0.68
HERC2-204ENST00000563945 SAP18O00422 153 aaKnown RBP19.26■□□□□ 0.67
HERC2-204ENST00000563945 FGF17O60258 216 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 CD1DP15813 335 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 CD22P20273 847 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 SERPINB1P30740 379 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 ZNF791Q3KP31 576 aaPredicted RBP19.26■□□□□ 0.67
HERC2-204ENST00000563945 FBXW10Q5XX13 1052 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 OR4C11Q6IEV9 310 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 TGIF2LYQ8IUE0 185 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 BBOF1Q8ND07 529 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 PAQR8Q8TEZ7 354 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 PPWD1Q96BP3 646 aaKnown RBP19.26■□□□□ 0.67
HERC2-204ENST00000563945 SPACA9Q96E40 222 aaPredicted RBP19.26■□□□□ 0.67
HERC2-204ENST00000563945 RMND5BQ96G75 393 aaPredicted RBP19.26■□□□□ 0.67
HERC2-204ENST00000563945 GPATCH1Q9BRR8 931 aaKnown RBP19.26■□□□□ 0.67
HERC2-204ENST00000563945 CLEC4MQ9H2X3 399 aaPredicted RBP19.26■□□□□ 0.67
HERC2-204ENST00000563945 RYDENQ9NUL5 291 aaKnown RBP19.26■□□□□ 0.67
HERC2-204ENST00000563945 QPCTLQ9NXS2 382 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 ADGRE2Q9UHX3 823 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 PHF11Q9UIL8 331 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 AKAP6Q13023 2319 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 ABCA4P78363 2273 aa19.26■□□□□ 0.67
HERC2-204ENST00000563945 PRRC2AP48634 2157 aaKnown RBP19.25■□□□□ 0.67
HERC2-204ENST00000563945 DVL2O14641 736 aa19.25■□□□□ 0.67
HERC2-204ENST00000563945 OR10H2O60403 315 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms