RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 AGAP6Q5VW22 663 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 ALKBH5Q6P6C2 394 aaKnown RBP2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 PP632Q6XCG6 107 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 DZIP1Q86YF9 867 aaKnown RBP2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 LSMEM1Q8N8F7 131 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 CCDC191Q8NCU4 936 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 OR1K1Q8NGR3 316 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 ZNF799Q96GE5 643 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 CCT8L2Q96SF2 557 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 INTS14Q96SY0 518 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 FERMT1Q9BQL6 677 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 OR10A4Q9H209 315 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 IKZF5Q9H5V7 419 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 IGHV3-35A0A0C4DH35 117 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 EPOPA6NHQ4 379 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 RNF212BA8MTL3 300 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 PROS1P07225 676 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 HSD17B1P14061 328 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 PPP2R1BP30154 601 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 ZNF41P51814 821 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 CAPZA1P52907 286 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 ANKRD55Q3KP44 614 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 NHLRC1Q6VVB1 395 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 GCNT7Q6ZNI0 430 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 PCGF5Q86SE9 256 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 KIAA0895Q8NCT3 520 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 MRPL24Q96A35 216 aaKnown RBP2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 SIPA1Q96FS4 1042 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 CNDP2Q96KP4 475 aaKnown RBP2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 RAB40CQ96S21 281 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 TTYH2Q9BSA4 534 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 ATG101Q9BSB4 218 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 LSG1Q9H089 658 aaKnown RBP2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 DPEP3Q9H4B8 488 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 IL1RL2Q9HB29 575 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 MRPL17Q9NRX2 175 aaKnown RBP2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 FAM212BQ9NTI7 297 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 MLXQ9UH92 298 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 ANAPC5Q9UJX4 755 aa2.18□□□□□ -2.06
HMGB1P33-201ENST00000563485 GTPBP10A4D1E9 387 aaKnown RBP2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 FRG2CA6NGY1 282 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 CSDE1O75534 798 aaKnown RBP2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 LETM1O95202 739 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 ZFYP08048 801 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 SLC35E2P0CK97 266 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 PRKAR2BP31323 418 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 ZNF133P52736 654 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 UCNP55089 124 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 STX17P56962 302 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 EMC2Q15006 297 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 ODF2Q5BJF6 829 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 DCAF12Q5T6F0 453 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 CAPN13Q6MZZ7 669 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 SPATA19Q7Z5L4 167 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 CCDC197Q8NCU1 140 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 CHDHQ8NE62 594 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 TCP11Q8WWU5 503 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 FAF2Q96CS3 445 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 RAB3CQ96E17 227 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 C16orf58Q96GQ5 468 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 PCED1BQ96HM7 432 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 VSIG2Q96IQ7 327 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 MAGEB18Q96M61 343 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 TNMDQ9H2S6 317 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 PFDN4Q9NQP4 134 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 GPR173Q9NS66 373 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 TAS2R16Q9NYV7 291 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 SPG21Q9NZD8 308 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 KAT6BQ8WYB5 2073 aa2.17□□□□□ -2.06
HMGB1P33-201ENST00000563485 ARHGEF37A1IGU5 675 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 ZFP92A6NM28 416 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 KBTBD13C9JR72 458 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 M0R296 226 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 CCSO14618 274 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 CTDSPLO15194 276 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 KIAA0513O60268 411 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 EIF5BO60841 1220 aaKnown RBP2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 ANXA9O76027 345 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 IGKV3-11P04433 115 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 EZRP15311 586 aaKnown RBP2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 GLRA1P23415 457 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 OR1D2P34982 312 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 PRKCEQ02156 737 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 SLC3A1Q07837 685 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 MFGE8Q08431 387 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 PSMD6Q15008 389 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 UNC50Q53HI1 259 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 FAM219BQ5XKK7 198 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 CLEC4GQ6UXB4 293 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 C2orf66Q6UXQ4 117 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 SIGLEC15Q6ZMC9 328 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 WDR49Q8IV35 697 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 FBXW8Q8N3Y1 598 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 ARL14Q8N4G2 192 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 GVQW1Q8N7I0 195 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 OR2L5Q8NG80 312 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 OR4F5Q8NH21 305 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 FRAT1Q92837 279 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 PNPLA2Q96AD5 504 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms