RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 DDX5P17844 614 aaKnown RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 HIST1H1TP22492 207 aaPredicted RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 ATP5A1P25705 553 aaKnown RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 GCKP35557 465 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 RXRGP48443 463 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 EPHA4P54764 986 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 SESN3P58005 492 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 OR4D2P58180 307 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 E2F1Q01094 437 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 SLC34A1Q06495 639 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 TGM3Q08188 693 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 HEPACAMQ14CZ8 416 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 SHBQ15464 509 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 PRSS53Q2L4Q9 553 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 MPEG1Q2M385 716 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 MRM1Q6IN84 353 aaKnown RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 FBXO42Q6P3S6 717 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 TRIM40Q6P9F5 258 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 CYP2R1Q6VVX0 501 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 ZNF438Q7Z4V0 828 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 SPATA24Q86W54 205 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 IFNEQ86WN2 208 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 DHFR2Q86XF0 187 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 CALHM3Q86XJ0 350 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 TICAM1Q8IUC6 712 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 ZCCHC7Q8N3Z6 543 aaKnown RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 EID2Q8N6I1 236 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 AMER3Q8N944 861 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 FAM47BQ8NA70 645 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 GOLM1Q8NBJ4 401 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 SRFBP1Q8NEF9 429 aaKnown RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 VPS37AQ8NEZ2 397 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 OR4A15Q8NGL6 344 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 GOT1L1Q8NHS2 421 aaPredicted RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 GAL3ST3Q96A11 431 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 CIDECQ96AQ7 238 aaPredicted RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 PPCDCQ96CD2 204 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 TM4SF19Q96DZ7 209 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 DUS3LQ96G46 650 aaKnown RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 AURKBQ96GD4 344 aaPredicted RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 RSRC1Q96IZ7 334 aaKnown RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 ZNF578Q96N58 590 aaPredicted RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 ZNF583Q96ND8 569 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 FCRL4Q96PJ5 515 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 GBP5Q96PP8 586 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 OR2A5Q96R48 311 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 PANX1Q96RD7 426 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 ELF4Q99607 663 aaPredicted RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 SLC38A3Q99624 504 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 ZFYVE21Q9BQ24 234 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 MACROD1Q9BQ69 325 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 ECSITQ9BQ95 431 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 THUMPD3Q9BV44 507 aaKnown RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 KLHL25Q9H0H3 589 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 ABCG4Q9H172 646 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 KAT8Q9H7Z6 458 aaKnown RBP7.12□□□□□ -1.27
TPM1-231ENST00000561395 MIEF1Q9NQG6 463 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 PRDM7Q9NQW5 492 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 SH3BP4Q9P0V3 963 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 STOML1Q9UBI4 398 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 EGFL7Q9UHF1 273 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 USP22Q9UPT9 525 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 ERVK-11Q9UQG0 969 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 PCDHB3Q9Y5E6 796 aa7.12□□□□□ -1.27
TPM1-231ENST00000561395 A0A0J9YVX5 310 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 C1orf226A1L170 272 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 AQP12BA6NM10 295 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 H0YGG7 62 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 NVLO15381 856 aaKnown RBP7.11□□□□□ -1.27
TPM1-231ENST00000561395 PDPK1O15530 556 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 CPSF4O95639 269 aaKnown RBP7.11□□□□□ -1.27
TPM1-231ENST00000561395 ZNF888P0CJ79 500 aaPredicted RBP7.11□□□□□ -1.27
TPM1-231ENST00000561395 SMIM10L1P0DMW3 83 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 ALPPL2P10696 532 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 MYF5P13349 255 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 ST6GAL1P15907 406 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 EFNA1P20827 205 aaPredicted RBP7.11□□□□□ -1.27
TPM1-231ENST00000561395 PPIBP23284 216 aaKnown RBP7.11□□□□□ -1.27
TPM1-231ENST00000561395 CERS1P27544 350 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 EPHA8P29322 1005 aaPredicted RBP7.11□□□□□ -1.27
TPM1-231ENST00000561395 PTDSS1P48651 473 aaKnown RBP7.11□□□□□ -1.27
TPM1-231ENST00000561395 GZMMP51124 257 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 ARF3P61204 181 aaPredicted RBP7.11□□□□□ -1.27
TPM1-231ENST00000561395 INSM1Q01101 510 aaPredicted RBP7.11□□□□□ -1.27
TPM1-231ENST00000561395 BNIP3Q12983 259 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 GAB1Q13480 694 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 BIRC2Q13490 618 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 NR1D2Q14995 579 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 NDUFAF5Q5TEU4 345 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 IRAK1BP1Q5VVH5 260 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 FRMPD2BQ6IN97 320 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 THSD4Q6ZMP0 1018 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 LRRC74BQ6ZQY2 392 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 ZNF621Q6ZSS3 439 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 AQP12AQ8IXF9 295 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 SLC35F3Q8IY50 421 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 CACTIN-AS1Q8N1I8 211 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 SLC25A45Q8N413 288 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 DTWD1Q8N5C7 304 aa7.11□□□□□ -1.27
TPM1-231ENST00000561395 NATD1Q8N6N6 113 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms