RNA–Protein interactions for RNA: ENST00000561279.5

IDH3A-222, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 4

Gene IDH3A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-222	ENST00000561279	SENP5	Q96HI0	755 aa	Predicted RBP	12.81	□□□□□ -0.36
IDH3A-222	ENST00000561279	MS4A8	Q9BY19	250 aa		12.81	□□□□□ -0.36
IDH3A-222	ENST00000561279	CAB39L	Q9H9S4	337 aa		12.81	□□□□□ -0.36
IDH3A-222	ENST00000561279	IGSF5	Q9NSI5	407 aa		12.81	□□□□□ -0.36
IDH3A-222	ENST00000561279	TUBA8	Q9NY65	449 aa	Predicted RBP	12.81	□□□□□ -0.36
IDH3A-222	ENST00000561279	CNIH4	Q9P003	139 aa		12.81	□□□□□ -0.36
IDH3A-222	ENST00000561279	B4GALT7	Q9UBV7	327 aa		12.81	□□□□□ -0.36
IDH3A-222	ENST00000561279	BOK	Q9UMX3	212 aa	Predicted RBP	12.81	□□□□□ -0.36
IDH3A-222	ENST00000561279	ATG4B	Q9Y4P1	393 aa		12.81	□□□□□ -0.36
IDH3A-222	ENST00000561279	PCDHGB3	Q9Y5G1	929 aa		12.81	□□□□□ -0.36
IDH3A-222	ENST00000561279	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.81	□□□□□ -0.36
IDH3A-222	ENST00000561279	TACC2	O95359	2948 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279		A0A0G2JNJ9	132 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	PHGDH	O43175	533 aa	Known RBP	12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	WISP3	O95389	354 aa	Predicted RBP	12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	TGFB1	P01137	390 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	CCL3	P10147	92 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	PCNA	P12004	261 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	CD22	P20273	847 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	SERPINB3	P29508	390 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	STT3A	P46977	705 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	RAP1GDS1	P52306	607 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	RAB10	P61026	200 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	KCNJ2	P63252	427 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	PLIN5	Q00G26	463 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	ID2	Q02363	134 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	FOLH1	Q04609	750 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	CALCOCO2	Q13137	446 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	SLAMF1	Q13291	335 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	OR4D1	Q15615	310 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	ZNF791	Q3KP31	576 aa	Predicted RBP	12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	OR4C11	Q6IEV9	310 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	ADNP2	Q6IQ32	1131 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	ZNF793	Q6ZN11	406 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	CAPN12	Q6ZSI9	719 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	UBE3D	Q7Z6J8	389 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	CHDH	Q8NE62	594 aa	Predicted RBP	12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	TANK	Q92844	425 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	RGMA	Q96B86	450 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	GPR22	Q99680	433 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	PELO	Q9BRX2	385 aa	Known RBP	12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	RPF2	Q9H7B2	306 aa	Known RBP	12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	QPCTL	Q9NXS2	382 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	DNAJB12	Q9NXW2	375 aa	Known RBP	12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	RNF14	Q9UBS8	474 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279		Q9UFV3	132 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	PHF11	Q9UIL8	331 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	SNX24	Q9Y343	169 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	FAM215A	Q9Y5M1	114 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	LIPG	Q9Y5X9	500 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	SAR1B	Q9Y6B6	198 aa		12.8	□□□□□ -0.36
IDH3A-222	ENST00000561279	IQANK1	A0A1B0GTG1	560 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	HSPB2	A8KAH6	182 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	RTCA	O00442	366 aa	Known RBP	12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	EIF3H	O15372	352 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	SCEL	O95171	688 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	GSTA2	P09210	222 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	DNAJA1	P31689	397 aa	Known RBP	12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	SPR	P35270	261 aa	Predicted RBP	12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	PIGA	P37287	484 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	GP5	P40197	560 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	IGLV3-21	P80748	117 aa	Predicted RBP	12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	E2F2	Q14209	437 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	HSPB2	Q16082	182 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	RIPPLY2	Q5TAB7	128 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	DEPDC1	Q5TB30	811 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	KHDRBS2	Q5VWX1	349 aa	Known RBP	12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	RTL6	Q6ICC9	239 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	ARSK	Q6UWY0	536 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	C3orf62	Q6ZUJ4	267 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	RAPH1	Q70E73	1250 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	SLC29A4	Q7RTT9	530 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	WDR53	Q7Z5U6	358 aa	Predicted RBP	12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	GPR180	Q86V85	440 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	CREG2	Q8IUH2	290 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	LAS2	Q8IYD9	372 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	LIX1	Q8N485	282 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	OR7G3	Q8NG95	312 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	PAQR8	Q8TEZ7	354 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	NINJ1	Q92982	152 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	EXT2	Q93063	718 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	SPACA9	Q96E40	222 aa	Predicted RBP	12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	UBXN10	Q96LJ8	280 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	RBBP8	Q99708	897 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	NMRAL1	Q9HBL8	299 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	ZFP64	Q9NPA5	681 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	ACKR4	Q9NPB9	350 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	SMYD2	Q9NRG4	433 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	NUDT4	Q9NZJ9	180 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	OPTC	Q9UBM4	332 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	SPG11	Q96JI7	2443 aa		12.79	□□□□□ -0.36
IDH3A-222	ENST00000561279	FAM221A	A4D161	298 aa		12.78	□□□□□ -0.36
IDH3A-222	ENST00000561279	CAPN14	A8MX76	684 aa		12.78	□□□□□ -0.36
IDH3A-222	ENST00000561279		K7EPI3	171 aa		12.78	□□□□□ -0.36
IDH3A-222	ENST00000561279	TP73	O15350	636 aa		12.78	□□□□□ -0.36
IDH3A-222	ENST00000561279	FGF17	O60258	216 aa		12.78	□□□□□ -0.36
IDH3A-222	ENST00000561279	ZNF354A	O60765	605 aa	Predicted RBP	12.78	□□□□□ -0.36
IDH3A-222	ENST00000561279	SH3BGRL	O75368	114 aa		12.78	□□□□□ -0.36
IDH3A-222	ENST00000561279	PIAS1	O75925	651 aa		12.78	□□□□□ -0.36
IDH3A-222	ENST00000561279	NADK	O95544	446 aa	Predicted RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms