RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 IRF9Q00978 393 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 BIKQ13323 160 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 DDX39BQ13838 428 aaKnown RBP15.01□□□□□ -0.01
SNX1-213ENST00000561026 SETDB1Q15047 1291 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 PFKFB4Q16877 469 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 MPEG1Q2M385 716 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 EMC4Q5J8M3 183 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 NDUFAF5Q5TEU4 345 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 LIPJQ5W064 366 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 TMEM211Q6ICI0 200 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 OPN5Q6U736 354 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 SYT10Q6XYQ8 523 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 GK5Q6ZS86 529 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 ZNF572Q7Z3I7 529 aaPredicted RBP15.01□□□□□ -0.01
SNX1-213ENST00000561026 GPR180Q86V85 440 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 SLC22A16Q86VW1 577 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 MYLK4Q86YV6 388 aaPredicted RBP15.01□□□□□ -0.01
SNX1-213ENST00000561026 C17orf53Q8N3J3 647 aaPredicted RBP15.01□□□□□ -0.01
SNX1-213ENST00000561026 ZCCHC7Q8N3Z6 543 aaKnown RBP15.01□□□□□ -0.01
SNX1-213ENST00000561026 ACBD4Q8NC06 268 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 TANKQ92844 425 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 RBM18Q96H35 190 aaKnown RBP15.01□□□□□ -0.01
SNX1-213ENST00000561026 DGAT2Q96PD7 388 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 MTERF1Q99551 399 aaKnown RBP15.01□□□□□ -0.01
SNX1-213ENST00000561026 FAM173AQ9BQD7 235 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 CENPKQ9BS16 269 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 TTTY12Q9BZ98 90 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 ENKD1Q9H0I2 346 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 TP63Q9H3D4 680 aaPredicted RBP15.01□□□□□ -0.01
SNX1-213ENST00000561026 ANGPTL3Q9Y5C1 460 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 PCDHGA11Q9Y5H2 935 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 TEP1Q99973 2627 aaKnown RBP15.01□□□□□ -0.01
SNX1-213ENST00000561026 G3V3Y1 287 aa15□□□□□ -0.01
SNX1-213ENST00000561026 PLPP1O14494 284 aa15□□□□□ -0.01
SNX1-213ENST00000561026 KLK8O60259 260 aa15□□□□□ -0.01
SNX1-213ENST00000561026 IGKV3-11P04433 115 aa15□□□□□ -0.01
SNX1-213ENST00000561026 GFAPP14136 432 aa15□□□□□ -0.01
SNX1-213ENST00000561026 PTX3P26022 381 aaPredicted RBP15□□□□□ -0.01
SNX1-213ENST00000561026 TLX1P31314 330 aaPredicted RBP15□□□□□ -0.01
SNX1-213ENST00000561026 ARFIP1P53367 373 aa15□□□□□ -0.01
SNX1-213ENST00000561026 ALDH18A1P54886 795 aaKnown RBP15□□□□□ -0.01
SNX1-213ENST00000561026 FOLH1Q04609 750 aa15□□□□□ -0.01
SNX1-213ENST00000561026 ACAP2Q15057 778 aa15□□□□□ -0.01
SNX1-213ENST00000561026 PIGGQ5H8A4 983 aa15□□□□□ -0.01
SNX1-213ENST00000561026 C18orf63Q68DL7 685 aa15□□□□□ -0.01
SNX1-213ENST00000561026 CEP128Q6ZU80 1094 aa15□□□□□ -0.01
SNX1-213ENST00000561026 NUBPLQ8TB37 319 aa15□□□□□ -0.01
SNX1-213ENST00000561026 PPWD1Q96BP3 646 aaKnown RBP15□□□□□ -0.01
SNX1-213ENST00000561026 ACTR8Q9H981 624 aa15□□□□□ -0.01
SNX1-213ENST00000561026 DMRT3Q9NQL9 472 aa15□□□□□ -0.01
SNX1-213ENST00000561026 SNX15Q9NRS6 342 aa15□□□□□ -0.01
SNX1-213ENST00000561026 PHF11Q9UIL8 331 aa15□□□□□ -0.01
SNX1-213ENST00000561026 ATG4BQ9Y4P1 393 aa15□□□□□ -0.01
SNX1-213ENST00000561026 CCDC168Q8NDH2 2452 aa15□□□□□ -0.01
SNX1-213ENST00000561026 DNAJC13O75165 2243 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 A0A096LPK6 155 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 ESYT3A0FGR9 886 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 H0YIV9 168 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 DYRK3O43781 588 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 UGDHO60701 494 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 KLHL2O95198 593 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 RPS13P62277 151 aaKnown RBP14.99□□□□□ -0.01
SNX1-213ENST00000561026 PLIN5Q00G26 463 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 SLC7A5Q01650 507 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 TNFRSF17Q02223 184 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 FOXO1Q12778 655 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 ASPHQ12797 758 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 PCBP2Q15366 365 aaKnown RBP eCLIP14.99□□□□□ -0.01
SNX1-213ENST00000561026 DGAT2L6Q6ZPD8 337 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 FAM47EQ6ZV65 393 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 TMEM251Q8N6I4 163 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 ASB5Q8WWX0 329 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 RND1Q92730 232 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 MRRFQ96E11 262 aaKnown RBP14.99□□□□□ -0.01
SNX1-213ENST00000561026 C14orf79Q96F83 325 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 GPR78Q96P69 363 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 TREX2Q9BQ50 279 aaPredicted RBP14.99□□□□□ -0.01
SNX1-213ENST00000561026 ZNF717Q9BY31 904 aaPredicted RBP14.99□□□□□ -0.01
SNX1-213ENST00000561026 IL1RL2Q9HB29 575 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 SACM1LQ9NTJ5 587 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 ZDHHC18Q9NUE0 388 aa14.99□□□□□ -0.01
SNX1-213ENST00000561026 OR14I1A6ND48 311 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 LRRC14BA6NHZ5 514 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 NPIPA2E9PIF3 369 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 NPIPA3F8WFD2 350 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 HRKO00198 91 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 PROM1O43490 865 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 IGHG3P01860 377 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 P04436 131 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 CCL3P10147 92 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 ALOX15P16050 662 aaPredicted RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 CHRNB4P30926 498 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 HNRNPH2P55795 449 aaKnown RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 CUL3Q13618 768 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 GTF2H2Q13888 395 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 CPSF6Q16630 551 aaKnown RBP eCLIP14.98□□□□□ -0.01
SNX1-213ENST00000561026 HYAL4Q2M3T9 481 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 ZNF791Q3KP31 576 aaPredicted RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 GXYLT1Q4G148 440 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 GTF2H2CQ6P1K8 395 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms