RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 GALNT7Q86SF2 657 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 CCDC71Q8IV32 467 aaPredicted RBP6.72□□□□□ -1.33
GABPB1-211ENST00000561010 SCUBE1Q8IWY4 988 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 KLHDC8AQ8IYD2 350 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 PDIK1LQ8N165 341 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 TBC1D19Q8N5T2 526 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 TMEM156Q8N614 296 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 SNX31Q8N9S9 440 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 FAM98AQ8NCA5 519 aaKnown RBP6.72□□□□□ -1.33
GABPB1-211ENST00000561010 TRPV3Q8NET8 790 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 B3GNT7Q8NFL0 401 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 ATL1Q8WXF7 558 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 NRGNQ92686 78 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 SLCO2A1Q92959 643 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 TMEM125Q96AQ2 219 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 RHBDF1Q96CC6 855 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 PDLIM5Q96HC4 596 aaKnown RBP6.72□□□□□ -1.33
GABPB1-211ENST00000561010 VPS39Q96JC1 886 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 F2RL3Q96RI0 385 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 SORBS1Q9BX66 1292 aaKnown RBP6.72□□□□□ -1.33
GABPB1-211ENST00000561010 FAM129AQ9BZQ8 928 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 ACSS3Q9H6R3 686 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 SSU72Q9NP77 194 aaKnown RBP6.72□□□□□ -1.33
GABPB1-211ENST00000561010 CHST11Q9NPF2 352 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 IGSF5Q9NSI5 407 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 WWOXQ9NZC7 414 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 CTNNAL1Q9UBT7 734 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 SNX24Q9Y343 169 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 OARD1Q9Y530 152 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 KCNE2Q9Y6J6 123 aa6.72□□□□□ -1.33
GABPB1-211ENST00000561010 NUP214P35658 2090 aaPredicted RBP6.72□□□□□ -1.33
GABPB1-211ENST00000561010 LRIT2A6NDA9 550 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 SAP18O00422 153 aaKnown RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 FCHO1O14526 889 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 PRRG2O14669 202 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 CLGNO14967 610 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 B3GALT2O43825 422 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 PRKRAO75569 313 aaKnown RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 FAM155BO75949 473 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 SEC31AO94979 1220 aaKnown RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 LRATO95237 230 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 WISP3O95389 354 aaPredicted RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 IFNA16P05015 189 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 ENO2P09104 434 aaPredicted RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 EPORP19235 508 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 TFEBP19484 476 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 TRHRP34981 398 aaPredicted RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 PTGS2P35354 604 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 PTGER4P35408 488 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 SLC6A12P48065 614 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 KCNC1P48547 511 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 CLCN2P51788 898 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 GPR143P51810 404 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 LIM2P55344 173 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 ARL4CP56559 192 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 RAB38P57729 211 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 ETF1P62495 437 aaKnown RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 TLE4Q04727 773 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 SNTB1Q13884 538 aaKnown RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 TGFBIQ15582 683 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 EMC4Q5J8M3 183 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 FAM219BQ5XKK7 198 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 TMIGD1Q6UXZ0 262 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 ZNF793Q6ZN11 406 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 REC114Q7Z4M0 266 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 UBE3DQ7Z6J8 389 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 CREG2Q8IUH2 290 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 OR4N5Q8IXE1 308 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 ZBED8Q8IZ13 594 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 LGI4Q8N135 537 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 HORMAD2Q8N7B1 307 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 OR5M9Q8NGP3 310 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 FBXO27Q8NI29 283 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 GABPB2Q8TAK5 448 aaPredicted RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 FAM57AQ8TBR7 257 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 CA5BP1Q8WTZ4 195 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 FAR2Q96K12 515 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 KRT12Q99456 494 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 MAPKAP1Q9BPZ7 522 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 NAT9Q9BTE0 207 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 MCMBPQ9BTE3 642 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 DPH5Q9H2P9 285 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 TRIM45Q9H8W5 580 aaPredicted RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 MOCS1Q9NZB8 636 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 STOML1Q9UBI4 398 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 ZNF490Q9ULM2 529 aaPredicted RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 CORO1CQ9ULV4 474 aaPredicted RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 ERVK-11Q9UQG0 969 aa6.71□□□□□ -1.34
GABPB1-211ENST00000561010 KLF13Q9Y2Y9 288 aaPredicted RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 FLNAP21333 2647 aaKnown RBP6.71□□□□□ -1.34
GABPB1-211ENST00000561010 ARID1AO14497 2285 aa6.7□□□□□ -1.34
GABPB1-211ENST00000561010 URADA6NGE7 173 aa6.7□□□□□ -1.34
GABPB1-211ENST00000561010 ANKDD1BA6NHY2 528 aa6.7□□□□□ -1.34
GABPB1-211ENST00000561010 LRRC14BA6NHZ5 514 aa6.7□□□□□ -1.34
GABPB1-211ENST00000561010 WASHC1A8K0Z3 465 aa6.7□□□□□ -1.34
GABPB1-211ENST00000561010 A8MVJ9 347 aa6.7□□□□□ -1.34
GABPB1-211ENST00000561010 EFCAB8A8MWE9 144 aa6.7□□□□□ -1.34
GABPB1-211ENST00000561010 NPIPA2E9PIF3 369 aa6.7□□□□□ -1.34
GABPB1-211ENST00000561010 E9PLN8 166 aa6.7□□□□□ -1.34
GABPB1-211ENST00000561010 NPIPA3F8WFD2 350 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms