RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 COX7A2P14406 83 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 AGAP20933 346 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 CNR1P21554 472 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 PTX3P26022 381 aaPredicted RBP9.47□□□□□ -0.89
LDLR-214ENST00000560628 TLX1P31314 330 aaPredicted RBP9.47□□□□□ -0.89
LDLR-214ENST00000560628 PHBP35232 272 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 ARL1P40616 181 aaPredicted RBP9.47□□□□□ -0.89
LDLR-214ENST00000560628 PIK3CBP42338 1070 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 STT3AP46977 705 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 ALDH18A1P54886 795 aaKnown RBP9.47□□□□□ -0.89
LDLR-214ENST00000560628 HNRNPH2P55795 449 aaKnown RBP9.47□□□□□ -0.89
LDLR-214ENST00000560628 FOLH1Q04609 750 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 ASPHQ12797 758 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 GTF2H2Q13888 395 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 PIGGQ5H8A4 983 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 LIPJQ5W064 366 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 GTF2H2CQ6P1K8 395 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 KLC3Q6P597 504 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 RTL4Q6ZR62 310 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 GOLGA7Q7Z5G4 137 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 CCDC91Q7Z6B0 441 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 CD163Q86VB7 1156 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 GPALPP1Q8IXQ4 340 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 OR5L2Q8NGL0 311 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 UHMK1Q8TAS1 419 aaKnown RBP9.47□□□□□ -0.89
LDLR-214ENST00000560628 IFT81Q8WYA0 676 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 ZNF592Q92610 1267 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 SDCCAG3Q96C92 435 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 PHF21BQ96EK2 531 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 RBM18Q96H35 190 aaKnown RBP9.47□□□□□ -0.89
LDLR-214ENST00000560628 C16orf45Q96MC5 204 aaPredicted RBP9.47□□□□□ -0.89
LDLR-214ENST00000560628 CDK15Q96Q40 435 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 DMRTA2Q96SC8 542 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 VKORC1Q9BQB6 163 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 CENPKQ9BS16 269 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 COPS7AQ9UBW8 275 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 PCDHGA11Q9Y5H2 935 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 CENPEQ02224 2701 aa9.47□□□□□ -0.89
LDLR-214ENST00000560628 A0A1W2PR48 441 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 NPIPA2E9PIF3 369 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 NPIPA3F8WFD2 350 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 H0YIV9 168 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 PROM1O43490 865 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 TMPRSS11DO60235 418 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 KLK8O60259 260 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 ACSL3O95573 720 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 GBAP04062 536 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 BSGP35613 385 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 DNASE1L1P49184 302 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 SERPINB8P50452 374 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 IGLV3-21P80748 117 aaPredicted RBP9.46□□□□□ -0.9
LDLR-214ENST00000560628 TNFRSF17Q02223 184 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 ZNF267Q14586 743 aaPredicted RBP9.46□□□□□ -0.9
LDLR-214ENST00000560628 PCBP2Q15366 365 aaKnown RBP eCLIP9.46□□□□□ -0.91e-8■■□□□ 13.6
LDLR-214ENST00000560628 OPN5Q6U736 354 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 CYP20A1Q6UW02 462 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 MARVELD2Q8N4S9 558 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 PTGR2Q8N8N7 351 aaPredicted RBP9.46□□□□□ -0.9
LDLR-214ENST00000560628 OR5M9Q8NGP3 310 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 OR8K3Q8NH51 312 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 CA5BP1Q8WTZ4 195 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 TANKQ92844 425 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 ATP6V1E2Q96A05 226 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 TTTY12Q9BZ98 90 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 ACSS3Q9H6R3 686 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 NOL11Q9H8H0 719 aaKnown RBP9.46□□□□□ -0.9
LDLR-214ENST00000560628 SEMA4BQ9NPR2 832 aaPredicted RBP9.46□□□□□ -0.9
LDLR-214ENST00000560628 MS4A12Q9NXJ0 267 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 MTRF1LQ9UGC7 380 aaKnown RBP9.46□□□□□ -0.9
LDLR-214ENST00000560628 DMGDHQ9UI17 866 aaKnown RBP9.46□□□□□ -0.9
LDLR-214ENST00000560628 PHF11Q9UIL8 331 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 ASB4Q9Y574 426 aa9.46□□□□□ -0.9
LDLR-214ENST00000560628 TNPO3Q9Y5L0 923 aaKnown RBP9.46□□□□□ -0.9
LDLR-214ENST00000560628 PKDREJQ9NTG1 2253 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 A0A0A6YYD5 115 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 IQANK1A0A1B0GTG1 560 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 ATP6AP2A0A1C7CYW4 349 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 POC1B-GALNT4F8VUJ3 575 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 ACOT7O00154 380 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 OR7A17O14581 309 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 PGRMC2O15173 223 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 DYRK3O43781 588 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 OR10H2O60403 315 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 ATP6AP2O75787 350 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 CLDN9O95484 217 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 GPR75O95800 540 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 IGKV3-11P04433 115 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 P04436 131 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 INHBAP08476 426 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 FAM58BPP0C7Q3 252 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 CCL3P10147 92 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 ALOX15P16050 662 aaPredicted RBP9.45□□□□□ -0.9
LDLR-214ENST00000560628 PTGER4P35408 488 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 PIGAP37287 484 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 HERVK_113P63132 956 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 ERVK-8P63133 956 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 PHEXP78562 749 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 WHAMMP3Q1A5X7 153 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 MPEG1Q2M385 716 aa9.45□□□□□ -0.9
LDLR-214ENST00000560628 GXYLT1Q4G148 440 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms